Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 VN1R42P-201ENST00000424651 344 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 AC116655.1-201ENST00000508324 901 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 RNVU1-2-201ENST00000516326 135 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 RNU6-572P-201ENST00000516724 80 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 AC022861.1-201ENST00000522981 663 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 OR6C7P-201ENST00000547875 934 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 BNIP3P16-201ENST00000589779 534 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 MIR6134-201ENST00000617606 109 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 AC009269.6-201ENST00000621778 588 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 MIR302D-201ENST00000362275 68 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 USP9YP33-201ENST00000412220 421 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 USP9YP22-201ENST00000438971 294 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 RNU7-59P-201ENST00000459101 61 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AP003465.2-201ENST00000602571 373 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AP000860.1-201ENST00000605250 559 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AC004492.1-201ENST00000607036 742 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 RNU6-858P-201ENST00000362436 107 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 RNU6-114P-201ENST00000384704 105 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AC009518.2-201ENST00000418056 731 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 RPL21P111-201ENST00000418453 477 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AC098934.3-201ENST00000430450 190 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 MTND1P16-201ENST00000465177 898 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 TRBVA-201ENST00000498804 316 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 RN7SKP88-201ENST00000516847 250 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AP003392.2-201ENST00000527269 208 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 MTCO2P2-201ENST00000591258 225 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 7SK.8-201ENST00000612110 250 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 7SK.11-201ENST00000615477 250 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 7SK.13-201ENST00000622040 250 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 AC132825.7-201ENST00000638744 335 ntBASIC0.54□□□□□ -2.32
CDK5RAP2Q96SN8 TPMTP2-201ENST00000414372 726 ntBASIC0.53□□□□□ -2.32
CDK5RAP2Q96SN8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.53□□□□□ -2.32
CDK5RAP2Q96SN8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.53□□□□□ -2.32
CDK5RAP2Q96SN8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.53□□□□□ -2.32
CDK5RAP2Q96SN8 AC112220.2-201ENST00000605513 533 ntBASIC0.53□□□□□ -2.32
CDK5RAP2Q96SN8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.53□□□□□ -2.32
CDK5RAP2Q96SN8 LINC02555-201ENST00000563933 1951 ntBASIC0.53□□□□□ -2.33
CDK5RAP2Q96SN8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 MIR29B2-201ENST00000385055 81 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 AL357139.1-201ENST00000407792 426 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 RNU2-64P-201ENST00000411315 191 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 FABP5P15-201ENST00000453566 214 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 AC093809.1-201ENST00000509155 340 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 AC136618.2-201ENST00000575091 400 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 RNA5SP327-201ENST00000362494 101 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 RNU6-932P-201ENST00000391108 106 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 RNU2-23P-201ENST00000410545 195 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 RNA5SP127-201ENST00000411051 133 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 SNORA62.5-201ENST00000516634 120 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 AC007792.1-201ENST00000623023 402 ntBASIC0.52□□□□□ -2.33
CDK5RAP2Q96SN8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 SNORA4.1-201ENST00000364263 144 ntBASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 MIR194-1-201ENST00000384892 85 ntBASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 RNA5SP63-201ENST00000391225 112 ntBASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 AL096829.2-201ENST00000446582 742 ntBASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 AC093259.1-201ENST00000509755 300 ntBASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 AC136628.3-201ENST00000521868 290 ntBASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 AC005332.6-201ENST00000613178 446 ntBASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 AL357080.1-201ENST00000617394 239 ntBASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 AC253576.2-201ENST00000618815 580 ntBASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.51□□□□□ -2.33
CDK5RAP2Q96SN8 Y_RNA.458-201ENST00000384240 102 ntBASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 RNU6-622P-201ENST00000384272 103 ntBASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 RNU2-70P-201ENST00000410718 179 ntBASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 MTATP6P30-201ENST00000443540 664 ntBASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 MRPL42P4-201ENST00000453267 443 ntBASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 SNORA76.2-201ENST00000517095 137 ntBASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CDK5RAP2Q96SN8 AC138915.2-201ENST00000569776 97 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms