Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.45□□□□□ -2.34
IFT140Q96RY7 MZT1P2-201ENST00000604387 248 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 AC112220.2-201ENST00000605513 533 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 Y_RNA.99-201ENST00000363138 105 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 RNU6-1167P-201ENST00000363227 94 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 Y_RNA.167-201ENST00000363735 109 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 RNU6-1078P-201ENST00000364522 103 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 GPM6BP2-201ENST00000432046 144 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 RPS25P9-201ENST00000435591 252 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 GPM6BP1-201ENST00000446387 144 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 OR2AQ1P-201ENST00000451972 200 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.44□□□□□ -2.34
IFT140Q96RY7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.44□□□□□ -2.34
IFT140Q96RY7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.44□□□□□ -2.34
IFT140Q96RY7 VN1R82P-201ENST00000601481 356 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 AC012065.4-201ENST00000602445 679 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 AC068205.3-201ENST00000636385 468 ntBASIC0.44□□□□□ -2.34
IFT140Q96RY7 RNA5SP493-201ENST00000364115 91 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
IFT140Q96RY7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.43□□□□□ -2.34
IFT140Q96RY7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 RNU6-1274P-201ENST00000384557 107 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 Y_RNA.548-201ENST00000384656 105 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 MIR608-201ENST00000384820 100 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 RNU6-360P-201ENST00000390944 104 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 AL589872.1-201ENST00000426602 288 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.43□□□□□ -2.34
IFT140Q96RY7 OFD1P3Y-201ENST00000453312 783 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 RPL31P3-201ENST00000458430 332 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 RPL7P43-201ENST00000478876 753 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 AC118282.2-201ENST00000508739 374 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 MTND5P13-201ENST00000513046 1079 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 RNU6-927P-201ENST00000516199 100 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 RNU2-53P-201ENST00000516257 147 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 AL512310.8-201ENST00000550183 120 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 AL355802.4-201ENST00000607635 548 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 AC009237.15-201ENST00000610252 501 ntBASIC0.43□□□□□ -2.34
IFT140Q96RY7 MTCO2P31-201ENST00000402702 684 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.42□□□□□ -2.34
IFT140Q96RY7 TPTE2P1-204ENST00000435256 593 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 USP9YP22-201ENST00000438971 294 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC093259.1-201ENST00000509755 300 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 RNU6-197P-201ENST00000516680 100 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 RNU6-965P-201ENST00000516721 96 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 RN7SKP88-201ENST00000516847 250 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 RNU6-1183P-201ENST00000517054 60 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.42□□□□□ -2.34
IFT140Q96RY7 TRAV32-201ENST00000553993 340 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC008751.2-201ENST00000597885 980 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC091946.2-201ENST00000606105 291 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC098614.4-201ENST00000607601 462 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 AL133445.2-201ENST00000611191 527 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 7SK.8-201ENST00000612110 250 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 7SK.11-201ENST00000615477 250 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC009269.6-201ENST00000621778 588 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 7SK.13-201ENST00000622040 250 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 AC130454.1-201ENST00000622948 401 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 U6.99-201ENST00000637524 83 ntBASIC0.42□□□□□ -2.34
IFT140Q96RY7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.42□□□□□ -2.34
IFT140Q96RY7 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC138623.1-201ENST00000418060 216 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.41□□□□□ -2.34
IFT140Q96RY7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
IFT140Q96RY7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.41□□□□□ -2.34
IFT140Q96RY7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.41□□□□□ -2.34
IFT140Q96RY7 MTCO2P2-201ENST00000591258 225 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC073410.2-201ENST00000603240 332 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 MIR6134-201ENST00000617606 109 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC019226.1-201ENST00000625666 515 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC092447.10-201ENST00000620607 1652 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 SNORD115-48-201ENST00000364764 76 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 RNU6-160P-201ENST00000384591 107 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 RNU6-296P-201ENST00000384608 107 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 TAF13P2-201ENST00000416876 286 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AL139421.1-201ENST00000423010 169 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 SNX2P2-201ENST00000424553 323 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.41□□□□□ -2.34
IFT140Q96RY7 RNA5SP269-201ENST00000459032 137 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC026410.2-201ENST00000460281 156 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC136619.2-201ENST00000563361 631 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 MIR3169-201ENST00000578032 83 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 BNIP3P16-201ENST00000589779 534 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AP003465.2-201ENST00000602571 373 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AL161798.1-201ENST00000604630 131 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 AC013470.4-201ENST00000619978 986 ntBASIC0.41□□□□□ -2.34
IFT140Q96RY7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.4□□□□□ -2.35
IFT140Q96RY7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.4□□□□□ -2.35
IFT140Q96RY7 RPL21P111-201ENST00000418453 477 ntBASIC0.4□□□□□ -2.35
IFT140Q96RY7 MTCO1P3-201ENST00000429327 192 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms