Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC241585.2-209ENST00000638217 143 ntBASIC2.69□□□□□ -1.98
NR1H4Q96RI1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.69□□□□□ -1.98
NR1H4Q96RI1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC080100.1-201ENST00000624239 5356 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 RNU6-510P-201ENST00000391239 108 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AL356776.1-201ENST00000406574 447 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 EIF4EP4-201ENST00000424916 578 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 MTCO3P18-201ENST00000440206 761 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC104389.3-201ENST00000445629 235 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC114801.2-201ENST00000503825 781 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC096745.1-201ENST00000509945 370 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC091826.1-201ENST00000514065 313 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 SNORA31.11-201ENST00000516528 139 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 HPRT1P3-201ENST00000539521 576 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC034105.4-201ENST00000568304 277 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC011712.1-201ENST00000588959 234 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 SRGNP1-201ENST00000603392 451 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AL356157.2-201ENST00000605122 111 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 AC064836.2-201ENST00000609491 462 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 MIR5739-201ENST00000619803 80 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 CASC19-280ENST00000642102 1351 ntBASIC2.68□□□□□ -1.98
NR1H4Q96RI1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NR1H4Q96RI1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.67□□□□□ -1.98
NR1H4Q96RI1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
NR1H4Q96RI1 Y_RNA.72-201ENST00000362894 103 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 RNU6-529P-201ENST00000363383 104 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 U3.13-201ENST00000364804 214 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 RN7SKP27-201ENST00000410684 333 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 RNU2-63P-201ENST00000410792 194 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.67□□□□□ -1.98
NR1H4Q96RI1 AC005019.1-201ENST00000436455 431 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H4Q96RI1 RN7SL293P-201ENST00000481765 281 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 PRDX4P1-201ENST00000507189 574 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 AC092436.3-201ENST00000511788 257 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 RNA5SP82-201ENST00000516707 92 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 AP000889.2-201ENST00000532684 490 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H4Q96RI1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H4Q96RI1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.67□□□□□ -1.98
NR1H4Q96RI1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.67□□□□□ -1.98
NR1H4Q96RI1 AL160281.1-201ENST00000605307 311 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 AC034229.5-201ENST00000624258 185 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 MTCO1P12-201ENST00000414273 1543 ntBASIC2.67□□□□□ -1.98
NR1H4Q96RI1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NR1H4Q96RI1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NR1H4Q96RI1 MTND4P23-201ENST00000447723 1363 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 RNU6-562P-201ENST00000362731 107 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
NR1H4Q96RI1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NR1H4Q96RI1 RNU6-692P-201ENST00000384496 107 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 RNU6-876P-201ENST00000391295 104 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 BTF3L4P2-201ENST00000392798 346 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 MTND1P23-201ENST00000416931 372 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 CYCSP48-201ENST00000417124 323 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 RPL30P16-201ENST00000419341 429 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 RPL35AP12-201ENST00000425362 338 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 SNAP23P1-201ENST00000433229 246 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.66□□□□□ -1.98
NR1H4Q96RI1 CYP2C59P-201ENST00000457790 269 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 RPL9P9-202ENST00000466501 579 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 MTCO1P29-201ENST00000496868 288 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 AF213884.2-201ENST00000510417 903 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.66□□□□□ -1.98
NR1H4Q96RI1 AC010486.1-201ENST00000511793 424 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 SCOCP1-201ENST00000554676 349 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 MIR5571-201ENST00000577998 113 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.66□□□□□ -1.98
NR1H4Q96RI1 RPL30P11-203ENST00000598995 310 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.66□□□□□ -1.98
NR1H4Q96RI1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NR1H4Q96RI1 MIR622-201ENST00000638396 96 ntBASIC2.66□□□□□ -1.98
NR1H4Q96RI1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NR1H4Q96RI1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NR1H4Q96RI1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
NR1H4Q96RI1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.65□□□□□ -1.99
NR1H4Q96RI1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 RNA5SP240-201ENST00000365355 128 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 SNORD67-201ENST00000390833 111 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AMD1P1-201ENST00000457220 922 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 SNORA84-201ENST00000459229 133 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 snoU13.14-201ENST00000459372 104 ntBASIC2.65□□□□□ -1.99
NR1H4Q96RI1 AC091153.1-201ENST00000466297 402 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms