Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC005019.1-201ENST00000436455 431 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 AL161788.1-201ENST00000441805 169 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.55□□□□□ -2
CMTM3Q96MX0 RNU7-66P-201ENST00000459469 62 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.55□□□□□ -2
CMTM3Q96MX0 AC104576.1-201ENST00000524225 88 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.55□□□□□ -2
CMTM3Q96MX0 AC093249.1-201ENST00000567049 203 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 SNORA59B-202ENST00000578183 701 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 MIR3605-201ENST00000583214 100 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
CMTM3Q96MX0 ELOCP5-201ENST00000604924 333 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 AC090617.10-201ENST00000624308 134 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.55□□□□□ -2
CMTM3Q96MX0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.54□□□□□ -2
CMTM3Q96MX0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.54□□□□□ -2
CMTM3Q96MX0 AC073346.2-201ENST00000624724 2058 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 MTCO1P12-201ENST00000414273 1543 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CMTM3Q96MX0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CMTM3Q96MX0 MTND4P5-201ENST00000435821 1374 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 SNORA38-201ENST00000363946 132 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CMTM3Q96MX0 MIR512-1-201ENST00000384913 84 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CMTM3Q96MX0 AC009161.1-201ENST00000417306 376 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 SYF2P2-201ENST00000417620 583 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.54□□□□□ -2
CMTM3Q96MX0 AL031659.1-201ENST00000447075 539 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 AP000705.1-201ENST00000454567 350 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.54□□□□□ -2
CMTM3Q96MX0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.54□□□□□ -2
CMTM3Q96MX0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.54□□□□□ -2
CMTM3Q96MX0 AC026371.1-201ENST00000551867 419 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 IMMP1LP2-201ENST00000552954 492 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.54□□□□□ -2
CMTM3Q96MX0 MIR3158-1-201ENST00000583596 81 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.54□□□□□ -2
CMTM3Q96MX0 AP001836.1-201ENST00000604675 523 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 AL355297.2-201ENST00000604792 129 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 AC008121.3-201ENST00000618726 433 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 AC091953.5-201ENST00000622919 233 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 AC100810.6-201ENST00000638068 285 ntBASIC2.54□□□□□ -2
CMTM3Q96MX0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CMTM3Q96MX0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.54□□□□□ -2
CMTM3Q96MX0 MTND4P23-201ENST00000447723 1363 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CMTM3Q96MX0 U3.13-201ENST00000364804 214 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 SNORD32A-201ENST00000364805 84 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.53□□□□□ -2
CMTM3Q96MX0 Y_RNA.414-201ENST00000384011 101 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.53□□□□□ -2
CMTM3Q96MX0 VN1R36P-201ENST00000414936 291 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.53□□□□□ -2
CMTM3Q96MX0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.53□□□□□ -2
CMTM3Q96MX0 AC006028.1-201ENST00000438379 402 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.53□□□□□ -2
CMTM3Q96MX0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.53□□□□□ -2
CMTM3Q96MX0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.53□□□□□ -2
CMTM3Q96MX0 AC109925.1-201ENST00000478069 331 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.53□□□□□ -2
CMTM3Q96MX0 AP005902.1-201ENST00000521358 186 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 CBX3P7-201ENST00000532876 502 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.53□□□□□ -2
CMTM3Q96MX0 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 TRAV32-201ENST00000553993 340 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.53□□□□□ -2
CMTM3Q96MX0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.53□□□□□ -2
CMTM3Q96MX0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.53□□□□□ -2
CMTM3Q96MX0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.53□□□□□ -2
CMTM3Q96MX0 AC084757.4-201ENST00000616350 526 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 AC006504.8-201ENST00000621046 635 ntBASIC2.53□□□□□ -2
CMTM3Q96MX0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.53□□□□□ -2
CMTM3Q96MX0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AP000560.1-201ENST00000624150 1937 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 RNU6-1252P-201ENST00000363054 104 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 RNA5SP72-201ENST00000364442 117 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 RNU6-1032P-201ENST00000384100 107 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 MIR181A2-201ENST00000384863 110 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AL162578.1-201ENST00000406202 378 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 RN7SKP27-201ENST00000410684 333 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 RNU4-47P-201ENST00000410876 114 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AP000275.1-201ENST00000411943 390 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AL513185.2-201ENST00000425543 193 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 RPL23AP95-201ENST00000426806 265 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AC078809.1-201ENST00000427601 140 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 MTATP6P13-201ENST00000438531 667 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 NFU1P2-201ENST00000448700 469 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 PRSS3P4-201ENST00000453323 162 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AL353752.1-201ENST00000454946 260 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AC008155.2-201ENST00000464337 397 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 RPL9P9-202ENST00000466501 579 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 SNRPGP7-201ENST00000469016 106 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AC022447.4-201ENST00000504053 364 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms