Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MIR412-201ENST00000362142 91 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 SNORD3E-201ENST00000362899 217 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 RNU6-529P-201ENST00000363383 104 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 RNU6-501P-201ENST00000364072 100 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
USP47Q96K76 MIR613-201ENST00000385248 95 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 RPL22P18-201ENST00000417197 377 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 PGBD4P6-201ENST00000421501 610 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AC137499.1-201ENST00000427602 88 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.79□□□□□ -2.12
USP47Q96K76 AL627311.1-201ENST00000431514 115 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AC119618.1-201ENST00000434191 222 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AL512286.1-201ENST00000439244 400 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.79□□□□□ -2.12
USP47Q96K76 KATNBL1P6-201ENST00000453433 915 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 HMGB1P35-201ENST00000503360 598 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 TPT1P8-201ENST00000510120 555 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 RNU6-586P-201ENST00000517265 104 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 ADI1P3-201ENST00000549509 470 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.79□□□□□ -2.12
USP47Q96K76 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.79□□□□□ -2.12
USP47Q96K76 MTCYBP33-201ENST00000575007 1130 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USP47Q96K76 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.79□□□□□ -2.12
USP47Q96K76 BNIP3P30-201ENST00000601184 574 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AC021646.1-201ENST00000605469 484 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AL031775.1-201ENST00000607014 887 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 RNU6-87P-201ENST00000607561 108 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 uc_338.15-201ENST00000615470 191 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AC027807.2-201ENST00000616099 408 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AC104010.1-201ENST00000616889 150 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 AC091932.3-201ENST00000624223 323 ntBASIC1.79□□□□□ -2.12
USP47Q96K76 RNU5E-1-201ENST00000362477 120 ntBASIC1.78□□□□□ -2.12
USP47Q96K76 RNY1-201ENST00000364228 113 ntBASIC1.78□□□□□ -2.12
USP47Q96K76 MRPL42P2-201ENST00000403169 426 ntBASIC1.78□□□□□ -2.12
USP47Q96K76 AC007283.2-201ENST00000424739 197 ntBASIC1.78□□□□□ -2.12
USP47Q96K76 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.78□□□□□ -2.12
USP47Q96K76 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.78□□□□□ -2.12
USP47Q96K76 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.78□□□□□ -2.12
USP47Q96K76 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.78□□□□□ -2.12
USP47Q96K76 HMGB3P17-201ENST00000504195 649 ntBASIC1.78□□□□□ -2.12
USP47Q96K76 AC112206.3-201ENST00000514578 389 ntBASIC1.78□□□□□ -2.12
USP47Q96K76 CR383656.8-201ENST00000549046 145 ntBASIC1.78□□□□□ -2.12
USP47Q96K76 MIR5697-201ENST00000578045 78 ntBASIC1.78□□□□□ -2.12
USP47Q96K76 AC245884.10-201ENST00000597355 337 ntBASIC1.78□□□□□ -2.12
USP47Q96K76 AP000240.1-201ENST00000609910 452 ntBASIC1.78□□□□□ -2.12
USP47Q96K76 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.78□□□□□ -2.12
USP47Q96K76 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USP47Q96K76 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
USP47Q96K76 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USP47Q96K76 RNU6-1010P-201ENST00000362757 107 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 RNU6-1214P-201ENST00000363650 109 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 RNU4-1-201ENST00000363925 141 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 RNU6-72P-201ENST00000384285 79 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 RNU6-39P-201ENST00000384344 107 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 MIR186-201ENST00000384988 86 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 MIR10A-201ENST00000385043 110 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 AL512604.1-201ENST00000404812 257 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 Y_RNA.608-201ENST00000410647 95 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.77□□□□□ -2.13
USP47Q96K76 MTND5P25-201ENST00000430499 799 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.77□□□□□ -2.13
USP47Q96K76 RPS4XP11-201ENST00000446897 772 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 RPL23AP3-201ENST00000453844 468 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.77□□□□□ -2.13
USP47Q96K76 HMGB1P30-201ENST00000492455 606 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.77□□□□□ -2.13
USP47Q96K76 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.77□□□□□ -2.13
USP47Q96K76 AC109329.1-201ENST00000518744 317 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.77□□□□□ -2.13
USP47Q96K76 AC093249.1-201ENST00000567049 203 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 AC026271.5-201ENST00000577873 130 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 AC098614.4-201ENST00000607601 462 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 MIR7974-201ENST00000615835 79 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 SDR42E1P4-201ENST00000620894 481 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 AC006927.3-201ENST00000638789 384 ntBASIC1.77□□□□□ -2.13
USP47Q96K76 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USP47Q96K76 RNU5F-6P-201ENST00000362979 116 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 RNU1-93P-201ENST00000364704 169 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 RNU6-1179P-201ENST00000384667 107 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 MIR518A2-201ENST00000384966 87 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 CISD1P1-201ENST00000393907 327 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 AL589872.1-201ENST00000426602 288 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.76□□□□□ -2.13
USP47Q96K76 AL365400.1-201ENST00000431854 640 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 AL360221.1-201ENST00000445989 335 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.76□□□□□ -2.13
USP47Q96K76 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.76□□□□□ -2.13
USP47Q96K76 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.76□□□□□ -2.13
USP47Q96K76 SNORD11.1-201ENST00000459482 85 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.76□□□□□ -2.13
USP47Q96K76 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.76□□□□□ -2.13
USP47Q96K76 AC091965.2-201ENST00000512324 613 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
USP47Q96K76 RNU6-123P-201ENST00000516163 102 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 MTND2P32-201ENST00000521584 1038 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 AC090821.2-201ENST00000523552 176 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms