Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.08□□□□□ -2.42
SPG11Q96JI7 RNU6-1243P-201ENST00000364028 107 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
SPG11Q96JI7 RNA5SP496-201ENST00000391240 109 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 MTATP6P31-201ENST00000406985 692 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 RNA5SP100-201ENST00000410903 110 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 RNA5SP59-201ENST00000410922 110 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.08□□□□□ -2.42
SPG11Q96JI7 AL353691.1-201ENST00000451332 387 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 AL049714.1-201ENST00000466686 347 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 AC116347.2-201ENST00000514912 523 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 RNU6-1308P-201ENST00000516817 103 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 IGJP1-201ENST00000522682 475 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 AC087685.1-201ENST00000587507 141 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 AL133370.2-201ENST00000619934 439 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 U1.36-201ENST00000620684 176 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.08□□□□□ -2.42
SPG11Q96JI7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 RNY1P8-201ENST00000383970 114 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 MIR140-201ENST00000385282 100 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 CALM2P3-201ENST00000400429 449 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AC139712.2-201ENST00000424302 339 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AL512844.2-201ENST00000433990 593 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 MRPS17P3-201ENST00000465453 385 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AP000797.1-201ENST00000478870 387 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 SNORA31.17-201ENST00000516953 127 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AC025423.2-201ENST00000537570 439 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AC013468.1-201ENST00000608680 598 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 MIR5739-201ENST00000619803 80 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AL049641.1-201ENST00000441055 1948 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AL391994.1-201ENST00000254724 282 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 RNU6-10P-201ENST00000384036 107 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 RNU6-439P-201ENST00000384188 106 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 RNU6-15P-201ENST00000384534 107 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 C1DP1-201ENST00000426049 402 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AC092573.2-201ENST00000434546 243 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 RPL18AP17-201ENST00000455326 198 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AP003066.2-201ENST00000529375 555 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 AP002826.1-201ENST00000608835 315 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 7SK.10-201ENST00000621414 298 ntBASIC-0.09□□□□□ -2.42
SPG11Q96JI7 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.09□□□□□ -2.42
SPG11Q96JI7 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 RNU6-730P-201ENST00000383954 104 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 MIR942-201ENST00000401111 86 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.1□□□□□ -2.43
SPG11Q96JI7 MTCO2P12-201ENST00000427426 682 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 MTCO3P45-201ENST00000443036 613 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 AP002371.1-201ENST00000463604 433 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 SNORA31.4-201ENST00000516049 129 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 RNA5SP503-201ENST00000517047 117 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 AC067904.2-201ENST00000517322 1283 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.1□□□□□ -2.43
SPG11Q96JI7 AC069304.2-201ENST00000605154 435 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC-0.1□□□□□ -2.43
SPG11Q96JI7 AP000943.4-201ENST00000622912 357 ntBASIC-0.1□□□□□ -2.43
SPG11Q96JI7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
SPG11Q96JI7 RNU6-884P-201ENST00000363889 107 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 RNU6-877P-201ENST00000383868 107 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 RNU6-98P-201ENST00000384173 107 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 MIR597-201ENST00000384968 97 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AL591034.2-201ENST00000402839 359 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 MIR1262-201ENST00000408276 93 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC245047.7-201ENST00000440265 293 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.11□□□□□ -2.43
SPG11Q96JI7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC021146.9-201ENST00000512503 156 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AP003392.2-201ENST00000527269 208 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC027104.1-201ENST00000563702 681 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC136618.2-201ENST00000575091 400 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC105148.1-201ENST00000604961 409 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AP000860.1-201ENST00000605250 559 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC040168.1-201ENST00000623594 991 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.11□□□□□ -2.43
SPG11Q96JI7 MIRLET7D-201ENST00000362263 87 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 SNORD14D-201ENST00000384390 87 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 BEND7P1-201ENST00000422058 457 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AL160275.3-201ENST00000423876 471 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms