Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL161423.1-201ENST00000613700 262 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 AC243829.7-201ENST00000633081 225 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 OR56A5-201ENST00000340110 738 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 RNU6-790P-201ENST00000384479 105 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 RNU6-306P-201ENST00000384617 107 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 MIR184-201ENST00000384962 84 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 MIR767-201ENST00000390228 109 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 RNU4-14P-201ENST00000410858 122 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 RNU6-325P-201ENST00000411132 105 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 AL591043.1-201ENST00000432461 424 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 AC087499.2-201ENST00000432861 149 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 AC013470.1-201ENST00000453438 462 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 U8.21-201ENST00000459536 136 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 AC025281.1-201ENST00000567026 265 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 AC090574.1-201ENST00000623186 233 ntBASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM43Q96BQ3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 MTND4P23-201ENST00000447723 1363 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 AC073325.2-201ENST00000339545 159 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 RNU6-428P-201ENST00000362942 107 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 Y_RNA.151-201ENST00000363566 112 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 Y_RNA.259-201ENST00000364619 101 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 Y_RNA.431-201ENST00000384086 102 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 Y_RNA.460-201ENST00000384255 102 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 SNORD116-20-201ENST00000384529 92 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 MIR517A-201ENST00000385001 87 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 FTH1P15-201ENST00000406984 280 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 ATG3P1-201ENST00000419507 911 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 SNORD109B-201ENST00000458961 67 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 SNORD109A-201ENST00000459128 67 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 SNORD19.2-201ENST00000516978 73 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 ACA59.2-201ENST00000517061 156 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 GLYCAM1-201ENST00000546596 285 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 AL591516.1-201ENST00000611326 274 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 AC091903.1-201ENST00000624322 454 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 AC092435.3-201ENST00000565538 3654 ntBASIC3.27□□□□□ -1.89
TRIM43Q96BQ3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 RPL9P7-201ENST00000330965 580 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 RNU6-336P-201ENST00000364891 107 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 RNA5SP354-201ENST00000391247 136 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 RPS20P15-201ENST00000412792 311 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AC096649.2-201ENST00000416186 393 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AL513043.1-201ENST00000439124 535 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 DAP3P1-201ENST00000441522 278 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 SNORD19B-201ENST00000459623 84 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 RPL9P9-202ENST00000466501 579 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 MTCYBP40-201ENST00000509390 1135 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AC009163.5-201ENST00000575421 637 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 MIR5690-201ENST00000583739 73 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 PISRT1.1-201ENST00000616930 107 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AC126177.8-201ENST00000618339 1015 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AC022140.2-201ENST00000623500 188 ntBASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM43Q96BQ3 AC093908.1-201ENST00000623125 8092 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 RNU6-105P-201ENST00000363909 104 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 RNU6-851P-201ENST00000384565 107 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 RNU6-19P-201ENST00000384718 107 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 MIR196B-201ENST00000384852 84 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 MIR887-201ENST00000401258 79 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 RNU6-954P-201ENST00000411355 107 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 PTGES3P4-201ENST00000426243 356 ntBASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM43Q96BQ3 AL441985.1-201ENST00000457727 251 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms