Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 MTND2P14-201ENST00000482139 351 ntBASIC1.27□□□□□ -2.21
LMX1AQ8TE12 AC116347.2-201ENST00000514912 523 ntBASIC1.27□□□□□ -2.21
LMX1AQ8TE12 RNA5SP337-201ENST00000517007 109 ntBASIC1.27□□□□□ -2.21
LMX1AQ8TE12 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.27□□□□□ -2.21
LMX1AQ8TE12 IMMP1LP2-201ENST00000552954 492 ntBASIC1.27□□□□□ -2.21
LMX1AQ8TE12 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.27□□□□□ -2.21
LMX1AQ8TE12 WISP1-OT1-201ENST00000602893 642 ntBASIC1.27□□□□□ -2.21
LMX1AQ8TE12 AC021646.1-201ENST00000605469 484 ntBASIC1.27□□□□□ -2.21
LMX1AQ8TE12 AC103810.8-201ENST00000607347 118 ntBASIC1.27□□□□□ -2.21
LMX1AQ8TE12 AP000240.1-201ENST00000609910 452 ntBASIC1.27□□□□□ -2.21
LMX1AQ8TE12 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.27□□□□□ -2.21
LMX1AQ8TE12 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.27□□□□□ -2.21
LMX1AQ8TE12 MIR3529-201ENST00000637713 78 ntBASIC1.27□□□□□ -2.21
LMX1AQ8TE12 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LMX1AQ8TE12 RBBP8P1-201ENST00000449447 1844 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC073343.1-201ENST00000328239 651 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 RNU6-529P-201ENST00000363383 104 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 RNU6-190P-201ENST00000384154 102 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC068050.1-201ENST00000394891 380 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 MIR1283-2-201ENST00000408621 87 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 Y_RNA.608-201ENST00000410647 95 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC098592.1-201ENST00000419352 333 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC245517.4-201ENST00000448601 281 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 RNA5SP102-201ENST00000516865 106 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 MIR3198-2-201ENST00000577868 80 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 RPL30P11-203ENST00000598995 310 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AL031775.1-201ENST00000607014 887 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC138749.5-201ENST00000611461 208 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC016597.2-201ENST00000613256 341 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AL359547.2-201ENST00000615810 418 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC116165.2-201ENST00000616705 206 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC024940.5-201ENST00000622889 474 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AL359740.1-201ENST00000624340 592 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 AC006927.3-201ENST00000638789 384 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
LMX1AQ8TE12 MTND5P10-201ENST00000603719 1809 ntBASIC1.26□□□□□ -2.21
LMX1AQ8TE12 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LMX1AQ8TE12 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
LMX1AQ8TE12 SNORD3E-201ENST00000362899 217 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 SNORD56.2-201ENST00000363242 71 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 SNORD14B-201ENST00000364533 90 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 RNU6-809P-201ENST00000384461 107 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 MIR186-201ENST00000384988 86 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 AC009310.1-201ENST00000414414 451 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 AL354941.1-201ENST00000438600 464 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 AL512286.1-201ENST00000439244 400 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.25□□□□□ -2.21
LMX1AQ8TE12 snoU13.14-201ENST00000459372 104 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 AC112206.3-201ENST00000514578 389 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 RNU6-970P-201ENST00000516312 107 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 RNU7-51P-201ENST00000516560 62 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.25□□□□□ -2.21
LMX1AQ8TE12 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.25□□□□□ -2.21
LMX1AQ8TE12 MIR5697-201ENST00000578045 78 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 ELOCP5-201ENST00000604924 333 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 RNU6-87P-201ENST00000607561 108 ntBASIC1.25□□□□□ -2.21
LMX1AQ8TE12 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LMX1AQ8TE12 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.25□□□□□ -2.21
LMX1AQ8TE12 FARSBP1-201ENST00000435808 1778 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 MTND5P35-201ENST00000557537 1720 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 RNU6-371P-201ENST00000364283 108 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 RNU6-384P-201ENST00000364900 104 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 RNU6-1032P-201ENST00000384100 107 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 RNU6-533P-201ENST00000384144 107 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.24□□□□□ -2.21
LMX1AQ8TE12 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
LMX1AQ8TE12 AC114491.1-201ENST00000416095 246 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.24□□□□□ -2.21
LMX1AQ8TE12 AL365184.2-201ENST00000431139 435 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 RPL22P17-201ENST00000438729 315 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.24□□□□□ -2.21
LMX1AQ8TE12 AC006512.1-201ENST00000468816 291 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 RNU2-53P-201ENST00000516257 147 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 SNORA44.1-201ENST00000517031 108 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 AP003181.2-201ENST00000528941 181 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 DUXAP5-201ENST00000529668 529 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.24□□□□□ -2.21
LMX1AQ8TE12 PCMTD1P2-201ENST00000565017 355 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 MIR4452-201ENST00000583004 71 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.24□□□□□ -2.21
LMX1AQ8TE12 BNIP3P39-201ENST00000601077 554 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 AL451064.1-201ENST00000607718 471 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 TUSC7.1-201ENST00000610969 165 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
LMX1AQ8TE12 uc_338.15-201ENST00000615470 191 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 AL132822.1-201ENST00000617063 513 ntBASIC1.24□□□□□ -2.21
LMX1AQ8TE12 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.24□□□□□ -2.21
LMX1AQ8TE12 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms