Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 MIR95-201ENST00000385072 81 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 TPTE2P5-203ENST00000458118 728 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 RNU6-333P-201ENST00000459117 107 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 snoU13.14-201ENST00000459372 104 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 RNA5SP401-201ENST00000515920 127 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 RNU6-506P-201ENST00000516553 94 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AC109479.2-201ENST00000517842 174 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 CENPUP1-201ENST00000526649 1202 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AL512360.1-201ENST00000555346 234 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AL133241.1-201ENST00000556832 487 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 ANP32BP3-201ENST00000559213 706 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 VN1R80P-201ENST00000597126 338 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AC025165.5-201ENST00000602802 578 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 uc_338.15-201ENST00000615470 191 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AL159153.1-201ENST00000619688 317 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AC012640.5-201ENST00000623897 319 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AC092608.2-201ENST00000624427 218 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 AC073346.2-201ENST00000624724 2058 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 RNU6-82P-201ENST00000363970 107 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 MIR514A2-201ENST00000385131 88 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 MIR514A3-201ENST00000385132 88 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 RNA5SP219-201ENST00000390940 113 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 SNORD37.1-201ENST00000390968 65 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 AL117339.3-201ENST00000418733 162 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 AC092017.2-201ENST00000427600 362 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 MTND3P21-201ENST00000433774 331 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 AL121601.2-201ENST00000438019 707 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 RNU2-53P-201ENST00000516257 147 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 RNU6-720P-201ENST00000516363 108 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 AC034105.4-201ENST00000568304 277 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 RPS3AP23-202ENST00000574601 686 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 RPL30P11-203ENST00000598995 310 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 AC009314.1-201ENST00000603871 304 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 SNORD14A-201ENST00000606526 91 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 Z82243.1-201ENST00000609432 473 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 MIR5739-201ENST00000619803 80 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 DUXAP9-208ENST00000622815 614 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 AC097372.5-201ENST00000623665 376 ntBASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC197Q8NCU1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AC002543.1-201ENST00000299783 1954 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 RNU6-428P-201ENST00000362942 107 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 RNU6-527P-201ENST00000363425 104 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 SNORA3A-201ENST00000364113 130 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 RNU6-336P-201ENST00000364891 107 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 Y_RNA.372-201ENST00000365599 102 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 MIR134-201ENST00000385258 73 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AL591043.1-201ENST00000432461 424 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 SNORD109B-201ENST00000458961 67 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 SNORD109A-201ENST00000459128 67 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 RPL30P12-201ENST00000474666 353 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AL121594.1-201ENST00000475906 575 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AC097462.2-201ENST00000504623 481 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 RNU6-377P-201ENST00000515965 102 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AC069113.1-201ENST00000517763 267 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AP005902.1-201ENST00000521358 186 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 CYCSP27-201ENST00000527643 293 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AC093249.1-201ENST00000567049 203 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AF250324.2-201ENST00000608299 610 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AC006133.1-201ENST00000617106 264 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 U4atac.1-201ENST00000618345 95 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms