Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 RNU2-52P-201ENST00000410680 190 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 AL109933.2-201ENST00000452651 260 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 SNORD109B-201ENST00000458961 67 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 SNORD109A-201ENST00000459128 67 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 RNU7-138P-201ENST00000459479 64 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 AC133134.1-201ENST00000466800 359 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 RPL31P41-201ENST00000477967 372 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 GZMAP1-201ENST00000503054 631 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 AC018710.1-201ENST00000506509 158 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 PRDX4P1-201ENST00000507189 574 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 SNORA31.11-201ENST00000516528 139 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 RNU6-1069P-201ENST00000516612 133 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.56□□□□□ -2
CPSF7Q8N684 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 MIR5692C1-201ENST00000585309 91 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 AL391813.1-201ENST00000603098 260 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 CTHRC1P1-201ENST00000605383 469 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 MIR6715A-201ENST00000615929 79 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 RMST_7.1-201ENST00000621935 268 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.56□□□□□ -2
CPSF7Q8N684 CASC19-280ENST00000642102 1351 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.55□□□□□ -2
CPSF7Q8N684 AC138393.1-203ENST00000327086 343 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 RNU1-112P-201ENST00000364401 164 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 Y_RNA.530-201ENST00000384587 101 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 MIR147B-201ENST00000390185 80 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 RNU6-876P-201ENST00000391295 104 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 AL356776.1-201ENST00000406574 447 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 USP9YP20-201ENST00000419224 558 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.55□□□□□ -2
CPSF7Q8N684 RPL7P37-201ENST00000425095 738 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 AL365400.1-201ENST00000431854 640 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 AC009296.1-201ENST00000443146 155 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 OSTCP8-201ENST00000445117 448 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 AL441985.1-201ENST00000457727 251 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 AC107626.1-201ENST00000471084 183 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 RPL23AP45-201ENST00000476406 468 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 FAM206BP-201ENST00000510179 541 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.55□□□□□ -2
CPSF7Q8N684 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.55□□□□□ -2
CPSF7Q8N684 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.55□□□□□ -2
CPSF7Q8N684 SNORA43.2-201ENST00000516652 128 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 RNU6-1314P-201ENST00000517139 104 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.55□□□□□ -2
CPSF7Q8N684 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 AC018638.8-201ENST00000588755 281 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 OR1M4P-201ENST00000589199 287 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 AC093913.1-201ENST00000614178 329 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 AC009033.1-201ENST00000624279 431 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.55□□□□□ -2
CPSF7Q8N684 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
CPSF7Q8N684 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.54□□□□□ -2
CPSF7Q8N684 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.54□□□□□ -2
CPSF7Q8N684 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.54□□□□□ -2
CPSF7Q8N684 RNU6-78P-201ENST00000362897 107 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 SNORD113-7-201ENST00000363762 77 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.54□□□□□ -2
CPSF7Q8N684 SNORA32.2-201ENST00000384049 122 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.54□□□□□ -2
CPSF7Q8N684 SNORD56-201ENST00000413522 71 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.54□□□□□ -2
CPSF7Q8N684 NDUFA5P4-201ENST00000436704 385 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AC011816.1-201ENST00000441346 546 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AC012308.1-201ENST00000451232 178 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.54□□□□□ -2
CPSF7Q8N684 MED28P2-201ENST00000475771 317 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.54□□□□□ -2
CPSF7Q8N684 AC025465.4-201ENST00000513422 638 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.54□□□□□ -2
CPSF7Q8N684 BTF3P12-201ENST00000519620 469 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AC087854.1-201ENST00000519706 414 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AC025423.5-201ENST00000550230 219 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 PSMA3P-201ENST00000555485 635 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.54□□□□□ -2
CPSF7Q8N684 AC009163.5-201ENST00000575421 637 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
CPSF7Q8N684 RPL23AP78-201ENST00000599928 470 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AL670379.10-201ENST00000604330 253 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AL670379.9-201ENST00000605428 253 ntBASIC2.54□□□□□ -2
CPSF7Q8N684 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
CPSF7Q8N684 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.54□□□□□ -2
CPSF7Q8N684 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CPSF7Q8N684 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.53□□□□□ -2
CPSF7Q8N684 RNU6-1252P-201ENST00000363054 104 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 SNORD116-20-201ENST00000384529 92 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 RNU6-748P-201ENST00000384648 107 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 MIR196B-201ENST00000384852 84 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 AL360182.1-201ENST00000397433 468 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 MIR450B-201ENST00000401182 78 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.53□□□□□ -2
CPSF7Q8N684 ARL5AP4-201ENST00000430731 512 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 MTCO3P18-201ENST00000440206 761 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 AL031274.1-201ENST00000450334 232 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms