Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 Y_RNA.226-201ENST00000364337 114 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 RNU6-611P-201ENST00000384276 104 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 MIR29C-201ENST00000385231 88 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 RNA5SP213-201ENST00000391031 106 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 BTF3L4P1-201ENST00000413813 468 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AL590556.1-201ENST00000423231 483 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 MTND2P33-201ENST00000506452 1031 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AC074344.1-201ENST00000512823 224 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 MIR3915-201ENST00000578518 97 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AC008749.1-201ENST00000597650 306 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AC091304.6-201ENST00000619761 202 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AC023510.2-201ENST00000622162 746 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 AL603839.4-201ENST00000624658 1005 ntBASIC2.08□□□□□ -2.08
HDDC3Q8N4P3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 RNU6-45P-201ENST00000384471 107 ntBASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 CYCSP46-201ENST00000423569 204 ntBASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 WARS2P1-201ENST00000429678 537 ntBASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 RPL31P35-201ENST00000431058 377 ntBASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 RPL39P29-201ENST00000447779 157 ntBASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 AP001893.2-201ENST00000526949 202 ntBASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 AC022616.8-201ENST00000533569 253 ntBASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 AC109446.2-201ENST00000567872 497 ntBASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 CLIC4P2-201ENST00000601934 717 ntBASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.07□□□□□ -2.08
HDDC3Q8N4P3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 RNU6-944P-201ENST00000364023 107 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 MT-TH-201ENST00000387441 69 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 RNU6-550P-201ENST00000391057 101 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 RNU6-1245P-201ENST00000411130 106 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 RNU6-607P-201ENST00000411283 108 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 USP9YP18-201ENST00000425912 695 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AC009961.2-201ENST00000435771 251 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 GAPDHP17-201ENST00000449858 1001 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 RPL23AP3-201ENST00000453844 468 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 RNU6-965P-201ENST00000516721 96 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 DUXAP5-201ENST00000529668 529 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 MTATP6P24-201ENST00000576835 677 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 MIR4299-201ENST00000577899 72 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AC091135.1-201ENST00000585943 307 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AC078795.2-201ENST00000602835 1252 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AL136363.2-201ENST00000604173 851 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 AC091932.3-201ENST00000624223 323 ntBASIC2.06□□□□□ -2.08
HDDC3Q8N4P3 RNU6-743P-201ENST00000364151 106 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 BTF3L4P2-201ENST00000392798 346 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 MIR1287-201ENST00000408492 90 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 RNU2-2P-201ENST00000410396 191 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 AL139156.1-201ENST00000412785 841 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 AL158823.1-201ENST00000418441 478 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 ART2BP-201ENST00000453501 499 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 MTCYBP1-201ENST00000454315 1119 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 AL353752.1-201ENST00000454946 260 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 RNU7-182P-201ENST00000459009 62 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 AC132942.1-201ENST00000486753 483 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 MTCYBP40-201ENST00000509390 1135 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 MRPS17P9-201ENST00000511924 393 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 AC104136.1-201ENST00000512969 394 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 AC117532.1-201ENST00000514638 323 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 RNA5SP182-201ENST00000516064 82 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 RNU6-1178P-201ENST00000516674 107 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 RNA5SP503-201ENST00000517047 117 ntBASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.05□□□□□ -2.08
HDDC3Q8N4P3 U2.15-201ENST00000611544 191 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms