Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AP000654.2-201ENST00000605633 586 ntBASIC3.24□□□□□ -1.89
KRT78Q8N1N4 RNU6-91P-201ENST00000607774 107 ntBASIC3.24□□□□□ -1.89
KRT78Q8N1N4 AC005014.2-201ENST00000607795 599 ntBASIC3.24□□□□□ -1.89
KRT78Q8N1N4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.24□□□□□ -1.89
KRT78Q8N1N4 MTND5P27-201ENST00000428871 1720 ntBASIC3.24□□□□□ -1.89
KRT78Q8N1N4 MTND5P30-201ENST00000452896 1731 ntBASIC3.24□□□□□ -1.89
KRT78Q8N1N4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 RNA5SP197-201ENST00000363357 119 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 Y_RNA.187-201ENST00000363918 113 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 RNU1-140P-201ENST00000365040 165 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 Y_RNA.339-201ENST00000365325 102 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 AL360182.1-201ENST00000397433 468 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 RNU6-370P-201ENST00000411008 104 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 AL030996.1-201ENST00000411430 235 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 AC093578.1-201ENST00000415219 368 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 CBX3P6-201ENST00000430257 527 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 MTCYBP9-201ENST00000431021 303 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 FABP5P14-201ENST00000437273 393 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 AC004383.1-201ENST00000438135 289 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 AC091179.1-201ENST00000461606 579 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 MTATP8P1-201ENST00000467115 207 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 RPS4XP22-201ENST00000480755 780 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 RPL36AP48-201ENST00000485521 314 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 RN7SKP24-201ENST00000515888 284 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 MIR2276-201ENST00000516886 89 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 SNORA31.18-201ENST00000517043 134 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 SNORA31.23-201ENST00000517219 133 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 TRAV32-201ENST00000553993 340 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 AC026470.2-201ENST00000561492 181 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 MIR3158-1-201ENST00000583596 81 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 SRGNP1-201ENST00000603392 451 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 MIR6128-201ENST00000615528 109 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.23□□□□□ -1.89
KRT78Q8N1N4 AL356274.2-201ENST00000624379 3752 ntBASIC3.23□□□□□ -1.89
KRT78Q8N1N4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AL359854.1-201ENST00000614203 1594 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 SNORD62.1-201ENST00000362541 86 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 SNORD114-19-201ENST00000363072 75 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 RNU6-487P-201ENST00000365430 104 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 MIR1289-1-201ENST00000408836 144 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 RNU6-325P-201ENST00000411132 105 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 RPL37P10-201ENST00000412884 288 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 Z98742.2-201ENST00000431564 187 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AL160004.2-201ENST00000432935 350 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 RPL23AP58-201ENST00000440453 469 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AL137792.2-201ENST00000443484 235 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 MTND1P17-201ENST00000448961 204 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AC010401.1-201ENST00000463867 348 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 SNRPGP7-201ENST00000469016 106 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AC008269.2-201ENST00000561915 1105 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 MIR3922-201ENST00000585192 84 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 RPS15AP11-201ENST00000594193 385 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AC006133.1-201ENST00000617106 264 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 AC138627.2-201ENST00000624202 601 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 MIR7515-201ENST00000637837 67 ntBASIC3.22□□□□□ -1.89
KRT78Q8N1N4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRT78Q8N1N4 RNU1-75P-201ENST00000347264 129 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 RNU6-1317P-201ENST00000364582 104 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 MIR544A-201ENST00000384855 91 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 MIR521-1-201ENST00000384902 87 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 MIR449B-201ENST00000384995 97 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 RPS29P13-201ENST00000402041 169 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 RNA5SP390-201ENST00000410191 113 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 Z98949.2-201ENST00000440996 144 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 AL731563.1-201ENST00000442202 214 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 CYCSP35-201ENST00000451978 304 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 HMGN1P18-201ENST00000457642 277 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 RNU7-187P-201ENST00000458985 68 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms