Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC093023.1-201ENST00000547375 507 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 AC074050.1-201ENST00000563247 211 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 AC090617.3-201ENST00000573670 475 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 AC008739.3-201ENST00000603262 127 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 AC010900.2-201ENST00000604508 210 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 AC012442.3-202ENST00000636742 206 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 snoU2_19.2-201ENST00000363024 80 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 RNU1-18P-201ENST00000363062 164 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-1203P-201ENST00000410703 110 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 AC074117.2-201ENST00000417130 397 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 SNORA71B-202ENST00000439232 272 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 MRPL42P6-201ENST00000486397 371 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 AF186996.7-201ENST00000492781 209 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 AC024220.1-201ENST00000603675 484 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 RPL23AP88-201ENST00000605759 454 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 AP001282.2-201ENST00000616149 309 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 AC141273.2-201ENST00000618989 130 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 AC024581.2-201ENST00000619986 252 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 SCARNA4-201ENST00000629045 128 ntBASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM48Q8IWZ4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 FAM35BP-202ENST00000497389 3337 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 SNORD27-201ENST00000363981 72 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 Y_RNA.237-201ENST00000364439 102 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-1286P-201ENST00000383871 107 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-926P-201ENST00000384075 107 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 RNY3P4-201ENST00000384428 101 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 MIR544A-201ENST00000384855 91 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 HMGN2P8-201ENST00000391458 268 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 AL079342.1-201ENST00000401460 267 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 TRBV12-2-201ENST00000489763 344 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-111P-201ENST00000517179 105 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 AC026403.1-201ENST00000518938 295 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 DEFB108E-201ENST00000524692 240 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 AC240442.1-201ENST00000616055 283 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 MIR376A1-201ENST00000616574 68 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 U7.8-201ENST00000619968 63 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 AL133412.1-201ENST00000380194 2992 ntBASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM48Q8IWZ4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 SNORD32A-201ENST00000364805 84 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 SNORA29-201ENST00000384183 140 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-17P-201ENST00000384245 107 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-18P-201ENST00000384527 107 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 MIR449B-201ENST00000384995 97 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 MIR487A-201ENST00000385009 80 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 SNORD115-46-201ENST00000390982 71 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 UBA52P6-201ENST00000399822 382 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 RNA5SP239-201ENST00000410218 129 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AC007969.2-201ENST00000441891 191 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 RPL26P9-201ENST00000457466 433 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AC087477.1-201ENST00000465747 340 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 RPS26P21-201ENST00000475397 348 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AC006445.2-201ENST00000510061 472 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AC104619.4-201ENST00000510773 249 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 Y_RNA.713-201ENST00000517013 96 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 MIR4659A-201ENST00000580269 81 ntBASIC3.61□□□□□ -1.83
TRIM48Q8IWZ4 MIR4300-201ENST00000581016 96 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms