Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR578-201ENST00000384828 96 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 MTATP6P16-201ENST00000434543 526 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 NDUFB1P2-201ENST00000449477 176 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AC027575.1-201ENST00000481064 460 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 RNA5SP458-201ENST00000516188 119 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 Vault.3-201ENST00000516676 95 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 Y_RNA.717-201ENST00000517106 92 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AC022880.1-201ENST00000534017 973 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 NDUFA5P6-201ENST00000542110 379 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AC136619.2-201ENST00000563361 631 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 MTCYBP33-201ENST00000575007 1130 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AC008521.1-201ENST00000587471 187 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AL603755.1-201ENST00000619504 163 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 RBBP8P1-201ENST00000449447 1844 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 RNU4-21P-201ENST00000362802 126 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 RNU6-942P-201ENST00000363002 107 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 RNU6-179P-201ENST00000363350 107 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 MT-TH-201ENST00000387441 69 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AL591034.2-201ENST00000402839 359 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 RNU6-195P-201ENST00000411352 109 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 RNA5SP111-201ENST00000411386 101 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 HMGN1P14-201ENST00000412459 517 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AC138623.1-201ENST00000418060 216 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 CYCSP49-201ENST00000420810 319 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AC073614.1-201ENST00000438690 650 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AL445567.1-201ENST00000439121 144 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 CALM1P1-201ENST00000442082 433 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AC018868.1-201ENST00000491307 315 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 RNU6-970P-201ENST00000516312 107 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AP004607.1-201ENST00000524456 203 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 MIR3682-201ENST00000581338 84 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 MIR4713-201ENST00000582691 75 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 BNIP3P30-201ENST00000601184 574 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AC090578.1-201ENST00000604955 591 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AL670379.4-201ENST00000605279 254 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AC093788.1-201ENST00000609356 927 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 MIR3529-201ENST00000637713 78 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AC006026.1-201ENST00000444025 1803 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.63□□□□□ -2.15
CDKL3Q8IVW4 AP000648.3-201ENST00000623539 4507 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 MIR126-201ENST00000362291 85 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 SNORD114-19-201ENST00000363072 75 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 SNORA40.3-201ENST00000390964 122 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 MIR934-201ENST00000401241 83 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 POLHP1-201ENST00000411806 470 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 BX510359.4-201ENST00000423750 193 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 ISCA1P6-201ENST00000427740 390 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AL360271.2-201ENST00000447710 161 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AC012308.1-201ENST00000451232 178 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 HMGB1P30-201ENST00000492455 606 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AC116562.3-201ENST00000506136 177 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AC090572.1-201ENST00000519251 160 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AC060788.1-201ENST00000521318 469 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AC068587.5-201ENST00000528506 175 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AC087883.1-201ENST00000551882 391 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AC073410.2-201ENST00000603240 332 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 SNRPGP17-201ENST00000603780 214 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 AC021646.1-201ENST00000605469 484 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 NDUFA8P1-201ENST00000605525 367 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 uc_338.5-201ENST00000611839 155 ntBASIC1.62□□□□□ -2.15
CDKL3Q8IVW4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms