Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NPHP3Q7Z494 RNU6-1287P-201ENST00000362914 107 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 RNU6-1060P-201ENST00000384664 107 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 RNU6-550P-201ENST00000391057 101 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 EEF1A1P40-201ENST00000412883 573 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 UBE2V1P10-201ENST00000414685 269 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 OR6C66P-201ENST00000414917 930 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.58□□□□□ -2
NPHP3Q7Z494 AL358453.1-201ENST00000422522 250 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 AL161651.1-201ENST00000440882 223 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 RNU7-26P-201ENST00000458980 63 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 AC140059.1-201ENST00000489238 361 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 AC022493.1-201ENST00000492984 337 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 AC023141.11-201ENST00000508864 202 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.58□□□□□ -2
NPHP3Q7Z494 RNA5SP503-201ENST00000517047 117 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.58□□□□□ -2
NPHP3Q7Z494 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.58□□□□□ -2
NPHP3Q7Z494 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.58□□□□□ -2
NPHP3Q7Z494 MTATP6P3-201ENST00000581686 676 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 AF250324.2-201ENST00000608299 610 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 AP001596.2-201ENST00000608410 312 ntBASIC2.58□□□□□ -2
NPHP3Q7Z494 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.58□□□□□ -2
NPHP3Q7Z494 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.58□□□□□ -2
NPHP3Q7Z494 AC010329.5-201ENST00000623497 2174 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 KPNA2P1-201ENST00000458289 1591 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 MTND4P27-201ENST00000450813 1354 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 Y_RNA.33-201ENST00000362591 102 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 SNORD3E-201ENST00000362899 217 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 Z98749.2-208ENST00000381646 500 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 RNU6-606P-201ENST00000384721 111 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 MIR578-201ENST00000384828 96 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 MIR489-201ENST00000384923 84 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 RNU6-780P-201ENST00000391030 104 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 RNU6-1158P-201ENST00000391167 107 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.57□□□□□ -2
NPHP3Q7Z494 MTCYBP8-201ENST00000422855 651 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 MTCYBP5-201ENST00000423752 1135 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.57□□□□□ -2
NPHP3Q7Z494 AL606489.2-201ENST00000433886 234 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 MTND1P1-201ENST00000445453 368 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.57□□□□□ -2
NPHP3Q7Z494 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.57□□□□□ -2
NPHP3Q7Z494 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.57□□□□□ -2
NPHP3Q7Z494 AC026801.1-201ENST00000497178 464 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 RNU6-720P-201ENST00000516363 108 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 SNORD19.2-201ENST00000516978 73 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 SNORA31.19-201ENST00000517079 126 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.57□□□□□ -2
NPHP3Q7Z494 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.57□□□□□ -2
NPHP3Q7Z494 AC012507.3-201ENST00000603556 477 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 AP001486.3-201ENST00000615334 372 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.57□□□□□ -2
NPHP3Q7Z494 AC139792.3-201ENST00000623525 224 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.57□□□□□ -2
NPHP3Q7Z494 AC099654.12-201ENST00000639868 649 ntBASIC2.57□□□□□ -2
NPHP3Q7Z494 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
NPHP3Q7Z494 AL139276.1-201ENST00000311910 1001 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 RNU6-371P-201ENST00000364283 108 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 RNU6-1072P-201ENST00000384703 107 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 RNU6-443P-201ENST00000384780 107 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 MIR218-1-201ENST00000384999 110 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 MTCO3P40-201ENST00000392516 676 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 RNU6-387P-201ENST00000411331 105 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.56□□□□□ -2
NPHP3Q7Z494 MTCO1P21-201ENST00000416634 589 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.56□□□□□ -2
NPHP3Q7Z494 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.56□□□□□ -2
NPHP3Q7Z494 AC007560.1-201ENST00000426912 237 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 WARS2P1-201ENST00000429678 537 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 C8orf59P1-201ENST00000429930 303 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.56□□□□□ -2
NPHP3Q7Z494 BRK1P2-201ENST00000442875 223 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 MTND1P18-201ENST00000448191 573 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.56□□□□□ -2
NPHP3Q7Z494 RPS29P11-201ENST00000496507 171 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 MTCO3P9-201ENST00000506989 781 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.56□□□□□ -2
NPHP3Q7Z494 RNU6-1183P-201ENST00000517054 60 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.56□□□□□ -2
NPHP3Q7Z494 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.56□□□□□ -2
NPHP3Q7Z494 DNAJC19P9-201ENST00000555084 351 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.56□□□□□ -2
NPHP3Q7Z494 MIR4703-201ENST00000577728 79 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.56□□□□□ -2
NPHP3Q7Z494 MIR4303-201ENST00000581299 66 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 MIR4658-201ENST00000584344 65 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 AC012557.2-201ENST00000605919 418 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 AC092954.2-201ENST00000609103 430 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 AC017083.3-201ENST00000609955 700 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.56□□□□□ -2
NPHP3Q7Z494 SNORA51.11-201ENST00000384442 131 ntBASIC2.55□□□□□ -2
NPHP3Q7Z494 MIR147B-201ENST00000390185 80 ntBASIC2.55□□□□□ -2
NPHP3Q7Z494 RPL21P90-201ENST00000415692 466 ntBASIC2.55□□□□□ -2
NPHP3Q7Z494 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.55□□□□□ -2
NPHP3Q7Z494 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.55□□□□□ -2
NPHP3Q7Z494 AL596276.1-201ENST00000434465 418 ntBASIC2.55□□□□□ -2
NPHP3Q7Z494 NDUFA5P4-201ENST00000436704 385 ntBASIC2.55□□□□□ -2
NPHP3Q7Z494 AL031659.1-201ENST00000447075 539 ntBASIC2.55□□□□□ -2
NPHP3Q7Z494 AL360271.2-201ENST00000447710 161 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms