Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MIR196B-201ENST00000384852 84 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 RNA5SP210-201ENST00000391034 120 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AL139095.1-201ENST00000404326 391 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 RNU2-52P-201ENST00000410680 190 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 VN1R36P-201ENST00000414936 291 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 PDCL2P1-201ENST00000419302 352 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AL353572.1-201ENST00000442490 417 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AC092001.1-201ENST00000453012 261 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AC107626.1-201ENST00000471084 183 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 RNA5SP356-201ENST00000515972 94 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 RNU4-49P-201ENST00000516080 140 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 SNORA43.2-201ENST00000516652 128 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-826P-201ENST00000516827 104 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-323P-201ENST00000521915 107 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AP000763.2-201ENST00000540641 163 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 MIR3672-201ENST00000584290 82 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 UBE2V2P2-201ENST00000587677 504 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 VN1R107P-201ENST00000601784 209 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 RPL12P50-201ENST00000603116 116 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AC008121.1-201ENST00000603244 268 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AL357078.3-201ENST00000607528 618 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AL355073.2-201ENST00000612106 557 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 AC026241.1-201ENST00000517873 2142 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-1180P-201ENST00000364935 107 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-487P-201ENST00000365430 104 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-748P-201ENST00000384648 107 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 MIR767-201ENST00000390228 109 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 FTH1P15-201ENST00000406984 280 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 RNA5SP184-201ENST00000411071 108 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 AC009414.1-201ENST00000427200 443 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 RPL32P28-201ENST00000443577 397 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 MTND5P20-201ENST00000448677 143 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 AC006026.2-201ENST00000457376 180 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 AL049873.1-201ENST00000480540 376 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 MRPL42P6-201ENST00000486397 371 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 ACA59.2-201ENST00000517061 156 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 SCOCP1-201ENST00000554676 349 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 AC005261.5-201ENST00000596280 355 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-85P-201ENST00000605989 107 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 AC138627.2-201ENST00000624202 601 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 AL008636.1-201ENST00000625038 1018 ntBASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SYNE3Q6ZMZ3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 AC138393.1-203ENST00000327086 343 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-37P-201ENST00000362692 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-11P-201ENST00000364234 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-25P-201ENST00000383873 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-1-201ENST00000383898 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-48P-201ENST00000384161 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-36P-201ENST00000384172 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-4P-201ENST00000384205 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-5P-201ENST00000384238 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-3P-201ENST00000384314 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-16P-201ENST00000384385 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-15P-201ENST00000384534 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-2-201ENST00000384627 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-29P-201ENST00000384637 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-9-201ENST00000384776 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-33P-201ENST00000384793 107 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 MIR634-201ENST00000385208 97 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 MIR450B-201ENST00000401182 78 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RPS29P13-201ENST00000402041 169 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RPL7P37-201ENST00000425095 738 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 UBE2V1P4-201ENST00000425374 344 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 PTGES3P4-201ENST00000426243 356 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 snoU109.2-201ENST00000459316 135 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 AP001486.1-201ENST00000463339 476 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-581P-201ENST00000516214 105 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 RNA5SP282-201ENST00000516355 108 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 Y_RNA.702-201ENST00000516843 96 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 AC007151.1-201ENST00000572774 483 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 MIR4319-201ENST00000577285 85 ntBASIC3.03□□□□□ -1.92
SYNE3Q6ZMZ3 AC005730.3-201ENST00000583067 366 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms