Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 AC010631.1-201ENST00000474150 156 ntBASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 RPL30P6-201ENST00000475925 342 ntBASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 TRBVA-201ENST00000498804 316 ntBASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 RNU6-197P-201ENST00000516680 100 ntBASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 AL356057.1-201ENST00000533798 831 ntBASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 ZNF971P-201ENST00000562068 1249 ntBASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 AC112220.2-201ENST00000605513 533 ntBASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 AL450270.1-201ENST00000606160 391 ntBASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 AC130454.1-201ENST00000622948 401 ntBASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CCDC171Q6TFL3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 FTH1P15-201ENST00000406984 280 ntBASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 AL161935.2-201ENST00000414627 60 ntBASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 RPL37P6-201ENST00000460682 294 ntBASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 AC092989.1-201ENST00000481235 277 ntBASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 AC093809.1-201ENST00000509155 340 ntBASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 RN7SKP256-201ENST00000517201 314 ntBASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 AC093788.1-201ENST00000609356 927 ntBASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 AC010487.4-201ENST00000637027 61 ntBASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CCDC171Q6TFL3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 RNU6-1010P-201ENST00000362757 107 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 RNU6-288P-201ENST00000363690 104 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 RNU6-343P-201ENST00000364709 104 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 RNU6-481P-201ENST00000384194 107 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AL669831.1-202ENST00000428504 417 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 SNRPEP7-201ENST00000438350 220 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 GXYLT1P1-201ENST00000446657 490 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 BTF3P15-201ENST00000455606 336 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AP001189.2-201ENST00000527320 189 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AL353997.4-201ENST00000586196 166 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AC243829.6-201ENST00000612652 106 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AC243773.3-201ENST00000613270 256 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AL590240.4-201ENST00000616908 390 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AC093648.1-201ENST00000623546 606 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 MIR1248-201ENST00000629190 106 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AC121333.1-201ENST00000567488 2709 ntBASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CCDC171Q6TFL3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 RNU6-932P-201ENST00000391108 106 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 SNX2P2-201ENST00000424553 323 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 HSPE1P9-201ENST00000440046 311 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 AC130509.1-201ENST00000464158 433 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 AC114981.1-201ENST00000503897 678 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 RN7SKP88-201ENST00000516847 250 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 RNU6-1092P-201ENST00000516955 87 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 RN7SKP258-201ENST00000517151 304 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 MIR5094-201ENST00000578766 85 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 VN1R83P-201ENST00000595685 445 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 7SK.8-201ENST00000612110 250 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 7SK.11-201ENST00000615477 250 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 AL357080.1-201ENST00000617394 239 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 AC253576.2-201ENST00000618815 580 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 7SK.13-201ENST00000622040 250 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 AC022513.1-201ENST00000624512 117 ntBASIC0.51□□□□□ -2.33
CCDC171Q6TFL3 RNU6-952P-201ENST00000391164 108 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 RPL21P111-201ENST00000418453 477 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AC104651.1-201ENST00000427559 735 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 RNA5SP269-201ENST00000459032 137 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AC134050.1-201ENST00000495088 933 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 SNORA3.4-201ENST00000515969 96 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AC006518.2-201ENST00000542513 940 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 BNIP3P16-201ENST00000589779 534 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AC008751.2-201ENST00000597885 980 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AP001981.2-201ENST00000603241 418 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AC018926.1-201ENST00000616335 435 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AL445264.1-201ENST00000621719 171 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AC120349.3-201ENST00000624377 529 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 AC004808.1-201ENST00000627671 721 ntBASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
CCDC171Q6TFL3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
CCDC171Q6TFL3 MIR10B-201ENST00000385011 110 ntBASIC0.49□□□□□ -2.33
CCDC171Q6TFL3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CCDC171Q6TFL3 MRPL42P4-201ENST00000453267 443 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms