Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 RPS15AP9-201ENST00000439856 381 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC244505.5-201ENST00000443639 207 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 FDX1P2-201ENST00000450769 375 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC092001.1-201ENST00000453012 261 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AMD1P1-201ENST00000457220 922 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC008834.1-201ENST00000511612 175 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 Y_RNA.675-201ENST00000516389 149 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 Y_RNA.688-201ENST00000516565 95 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 Y_RNA.695-201ENST00000516715 107 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 SNORA31.19-201ENST00000517079 126 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AP002453.2-201ENST00000533503 320 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC135279.1-201ENST00000543493 504 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC040904.1-201ENST00000590850 223 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AL590229.1-201ENST00000603497 542 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 MIR98-201ENST00000606724 119 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC011939.3-201ENST00000613686 466 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AL158063.1-201ENST00000615349 536 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 MIR5739-201ENST00000619803 80 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 AC024940.5-201ENST00000622889 474 ntBASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
SMARCD3Q6STE5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 RNY1P12-201ENST00000364251 105 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 RNU6-166P-201ENST00000384371 107 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC068050.1-201ENST00000394891 380 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AL133475.1-201ENST00000404414 305 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC097463.2-201ENST00000421074 142 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 MED13P1-201ENST00000428342 171 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AL591704.1-201ENST00000432574 275 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC000111.3-201ENST00000433478 193 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 BRK1P2-201ENST00000442875 223 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 MTCO1P19-201ENST00000443487 500 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 snoU13.23-201ENST00000458863 104 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 snoU109.2-201ENST00000459316 135 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 RNU6-548P-201ENST00000517083 115 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 RNU6-1315P-201ENST00000517187 99 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC087883.1-201ENST00000551882 391 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AL157871.3-201ENST00000557231 293 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 MIR4528-201ENST00000577763 90 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC008521.1-201ENST00000587471 187 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC006566.1-201ENST00000608943 513 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC012409.4-201ENST00000612923 249 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC108479.2-201ENST00000617314 601 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AL157786.1-207ENST00000627771 695 ntBASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SMARCD3Q6STE5 FARSBP1-201ENST00000435808 1778 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 Y_RNA.359-201ENST00000365498 102 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 SNORA75-201ENST00000384158 137 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 RNU6-74P-201ENST00000384235 107 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 RNY3P9-201ENST00000384727 106 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 MIR578-201ENST00000384828 96 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 MIR301A-201ENST00000385261 86 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 SNORA40C-201ENST00000391285 128 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 MIR934-201ENST00000401241 83 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 MIR1323-201ENST00000408090 73 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 RNU2-8P-201ENST00000410727 190 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 MTND3P17-201ENST00000416968 344 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 AC016831.2-201ENST00000417179 352 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 C1DP2-201ENST00000418167 426 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 AC007098.1-201ENST00000420122 367 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 AL358934.1-201ENST00000432346 324 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 MTCO2P16-201ENST00000436962 677 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 AC079448.1-201ENST00000449377 373 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 AL583843.1-201ENST00000456070 346 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 SNRPFP4-201ENST00000456366 242 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 FO393415.2-201ENST00000480085 343 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 RPL36AP48-201ENST00000485521 314 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 RPL22P13-201ENST00000493291 347 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 AC117522.1-201ENST00000509821 380 ntBASIC1.36□□□□□ -2.19
SMARCD3Q6STE5 MTCO3P28-201ENST00000513351 515 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms