Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 Y_RNA.33-201ENST00000362591 102 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 SNORA38.1-201ENST00000364172 131 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 RNU6-173P-201ENST00000364215 104 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 RNU6-395P-201ENST00000365662 106 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 MIR491-201ENST00000384877 84 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 MIR301A-201ENST00000385261 86 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 CBX3P6-201ENST00000430257 527 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 DAP3P1-201ENST00000441522 278 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 AC008571.1-201ENST00000467232 300 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 AC105758.1-201ENST00000506038 399 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 RNU6-307P-201ENST00000516743 106 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 CBX3P8-201ENST00000532412 525 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 AC002545.1-201ENST00000592511 181 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 AL121917.1-203ENST00000605534 577 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 AC107871.2-201ENST00000612894 502 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 SNORA50A-202ENST00000629536 136 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 AC108206.1-201ENST00000570186 4159 ntBASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF549Q6P9A3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 GABRG2-229ENST00000641017 3628 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 Y_RNA.48-201ENST00000362710 103 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 Y_RNA.176-201ENST00000363815 109 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 SNORD14B-201ENST00000364533 90 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 RNU6-702P-201ENST00000364982 107 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 RNU6-1318P-201ENST00000365389 103 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 DEFB109C-201ENST00000382575 264 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 DEFB109B-201ENST00000382656 264 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 RNU6-784P-201ENST00000384330 106 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 Y_RNA.512-201ENST00000384518 102 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 RNU6-1109P-201ENST00000391187 107 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AL138885.1-201ENST00000405921 675 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AP000567.1-201ENST00000406413 156 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 RNU6-1025P-201ENST00000410629 104 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AL096701.2-201ENST00000416920 238 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 RPS29P6-201ENST00000438196 145 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AC099799.1-201ENST00000439809 192 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 RPL23AP31-201ENST00000456160 467 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 RNU6-635P-201ENST00000516651 102 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 RNU6-794P-201ENST00000517261 64 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AP000889.1-201ENST00000530968 660 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AL161670.1-201ENST00000554348 137 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AC012493.2-201ENST00000595083 291 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AC090425.1-201ENST00000610007 140 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AL355810.1-201ENST00000614629 552 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 MIR4272-201ENST00000635924 64 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AP003122.5-201ENST00000527668 3766 ntBASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF549Q6P9A3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 SNORA71.1-201ENST00000364523 117 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 RNU6-99P-201ENST00000364721 107 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 U8.8-201ENST00000365399 135 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 Y_RNA.389-201ENST00000383924 113 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 SNORA9-201ENST00000384215 133 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 MIR483-201ENST00000385070 76 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 SNORD56-201ENST00000413522 71 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 DPH3P2-201ENST00000422618 250 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 NDUFB1P2-201ENST00000449477 176 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 RPS29P2-201ENST00000479278 136 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 RPL17P19-201ENST00000489069 552 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 Y_RNA.668-201ENST00000516233 93 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 SNORA70.16-201ENST00000516390 95 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 RNU6-264P-201ENST00000517134 104 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 Y_RNA.721-201ENST00000517207 102 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 AC009812.2-201ENST00000517657 457 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 IGHV3-76-201ENST00000522465 295 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 HMGB1P14-201ENST00000557424 591 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms