Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 DEFB108F-201ENST00000344638 222 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 RNU6-142P-201ENST00000384019 107 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 SNORA51.5-201ENST00000384126 131 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 RNU6-1310P-201ENST00000384153 107 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 MIR526A2-201ENST00000390198 65 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 AL355497.1-201ENST00000406262 551 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 Y_RNA.617-201ENST00000410920 90 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 AC112220.1-201ENST00000434628 355 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 RPL23AP93-201ENST00000440847 484 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 FABP5P15-201ENST00000453566 214 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 RPS26P45-201ENST00000471748 340 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 AL049874.1-201ENST00000489560 388 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 RNU6-572P-201ENST00000516724 80 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 AC140113.4-201ENST00000622087 222 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 MIR3674-201ENST00000636576 68 ntBASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTC1Q2NKJ3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 MIR494-201ENST00000349529 81 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 Y_RNA.179-201ENST00000363844 90 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 SNORD115-8-201ENST00000363856 82 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 SNORD115-38-201ENST00000365037 82 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 Y_RNA.346-201ENST00000365385 112 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 RNY3P5-201ENST00000384127 102 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 MIR195-201ENST00000385194 87 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 RPL21P17-201ENST00000397467 475 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 RNA5SP475-201ENST00000410568 110 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 RNA5SP146-201ENST00000410743 123 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 AC011998.1-201ENST00000433403 117 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 AC243964.1-201ENST00000441814 261 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 snoU13.6-201ENST00000458785 104 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 SNRPGP7-201ENST00000469016 106 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 AC006445.2-201ENST00000510061 472 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 RN7SKP19-201ENST00000516016 252 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 RNU6-412P-201ENST00000516434 106 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 HSPE1P4-201ENST00000550617 308 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 PRELID2P1-201ENST00000552837 301 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 CYP4A27P-201ENST00000567218 190 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 AC025166.1-201ENST00000612411 163 ntBASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTC1Q2NKJ3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 Y_RNA.221-201ENST00000364248 96 ntBASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 SNORA70.4-201ENST00000365509 134 ntBASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 MIR450A2-201ENST00000385022 100 ntBASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 AC096649.2-201ENST00000416186 393 ntBASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 AC091390.3-201ENST00000426478 338 ntBASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 RPL31P13-201ENST00000484151 370 ntBASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 RNU6-970P-201ENST00000516312 107 ntBASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 AP004371.1-201ENST00000525240 214 ntBASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 AC015813.4-201ENST00000610469 179 ntBASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 MIR6715B-201ENST00000637172 77 ntBASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CTC1Q2NKJ3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CTC1Q2NKJ3 AL136360.1-201ENST00000503377 1900 ntBASIC4.84□□□□□ -1.64
CTC1Q2NKJ3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTC1Q2NKJ3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.83□□□□□ -1.64
CTC1Q2NKJ3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.83□□□□□ -1.64
CTC1Q2NKJ3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CTC1Q2NKJ3 RNU6-1205P-201ENST00000363625 106 ntBASIC4.83□□□□□ -1.64
CTC1Q2NKJ3 RNA5SP235-201ENST00000365411 114 ntBASIC4.83□□□□□ -1.64
CTC1Q2NKJ3 RNU6-597P-201ENST00000365620 102 ntBASIC4.83□□□□□ -1.64
CTC1Q2NKJ3 SNORA36A-201ENST00000384221 132 ntBASIC4.83□□□□□ -1.64
CTC1Q2NKJ3 RNU6-820P-201ENST00000384273 107 ntBASIC4.83□□□□□ -1.64
CTC1Q2NKJ3 RNU6-72P-201ENST00000384285 79 ntBASIC4.83□□□□□ -1.64
CTC1Q2NKJ3 RNU6-1152P-201ENST00000384576 107 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms