Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.52□□□□□ -1.85
SF3B3Q15393 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.52□□□□□ -1.85
SF3B3Q15393 MIR3921-201ENST00000577308 85 ntBASIC3.52□□□□□ -1.85
SF3B3Q15393 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SF3B3Q15393 MIR1273C-201ENST00000578669 77 ntBASIC3.52□□□□□ -1.85
SF3B3Q15393 MIR3671-201ENST00000580455 88 ntBASIC3.52□□□□□ -1.85
SF3B3Q15393 MIR4680-201ENST00000580906 66 ntBASIC3.52□□□□□ -1.85
SF3B3Q15393 AC002545.1-201ENST00000592511 181 ntBASIC3.52□□□□□ -1.85
SF3B3Q15393 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.52□□□□□ -1.85
SF3B3Q15393 RNU6-85P-201ENST00000605989 107 ntBASIC3.52□□□□□ -1.85
SF3B3Q15393 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SF3B3Q15393 RMST_4.1-201ENST00000616886 107 ntBASIC3.52□□□□□ -1.85
SF3B3Q15393 AL078596.1-201ENST00000624856 447 ntBASIC3.52□□□□□ -1.85
SF3B3Q15393 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SF3B3Q15393 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.52□□□□□ -1.85
SF3B3Q15393 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SF3B3Q15393 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SF3B3Q15393 AL359693.1-201ENST00000614959 2407 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SF3B3Q15393 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SF3B3Q15393 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 FTLP6-201ENST00000355274 422 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 Y_RNA.158-201ENST00000363651 101 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 RNU1-112P-201ENST00000364401 164 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 AL356057.3-201ENST00000402607 340 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 RNA5SP293-201ENST00000410527 113 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 RNU6-293P-201ENST00000411259 106 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 Z85995.1-201ENST00000415547 335 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.51□□□□□ -1.85
SF3B3Q15393 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.51□□□□□ -1.85
SF3B3Q15393 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.51□□□□□ -1.85
SF3B3Q15393 RPL23AP31-201ENST00000456160 467 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 RNU7-187P-201ENST00000458985 68 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 RPS20P22-201ENST00000473700 357 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 AC092185.1-201ENST00000491371 97 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.51□□□□□ -1.85
SF3B3Q15393 AL157871.3-201ENST00000557231 293 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.51□□□□□ -1.85
SF3B3Q15393 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.51□□□□□ -1.85
SF3B3Q15393 NUTF2P8-201ENST00000604593 363 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 AC007485.1-201ENST00000616755 206 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.51□□□□□ -1.85
SF3B3Q15393 FAM35CP-201ENST00000554755 2470 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 RNU6-463P-201ENST00000384340 107 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 Y_RNA.496-201ENST00000384444 101 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 RNU6-1179P-201ENST00000384667 107 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 SNORA46-201ENST00000384762 135 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 MIR301A-201ENST00000385261 86 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 MRPL42P3-201ENST00000401492 326 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 AL138827.1-201ENST00000402666 306 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 RNU6-985P-201ENST00000410182 104 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 RNA5SP38-201ENST00000410750 119 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3B3Q15393 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3B3Q15393 NDUFB4P7-201ENST00000423198 363 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 USMG5P1-201ENST00000425964 177 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 AL160004.2-201ENST00000432935 350 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3B3Q15393 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3B3Q15393 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3B3Q15393 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3B3Q15393 RNA5SP310-201ENST00000459084 116 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 RNU6-470P-201ENST00000515954 104 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 RNU1-86P-201ENST00000516108 154 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 RNA5SP384-201ENST00000516615 116 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 RNU1-107P-201ENST00000516617 154 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 RNU6-143P-201ENST00000516942 93 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.5□□□□□ -1.85
SF3B3Q15393 AP003122.3-201ENST00000526316 255 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 AC084851.1-201ENST00000529105 249 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.5□□□□□ -1.85
SF3B3Q15393 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.5□□□□□ -1.85
SF3B3Q15393 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.5□□□□□ -1.85
SF3B3Q15393 AC106900.2-201ENST00000604994 317 ntBASIC3.5□□□□□ -1.85
SF3B3Q15393 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SF3B3Q15393 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SF3B3Q15393 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.49□□□□□ -1.85
SF3B3Q15393 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.49□□□□□ -1.85
SF3B3Q15393 AC004944.1-201ENST00000517807 3059 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 RNU4-82P-201ENST00000362443 140 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 RNU6-490P-201ENST00000362985 107 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 Y_RNA.151-201ENST00000363566 112 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 RNU6-1059P-201ENST00000363752 98 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 Y_RNA.324-201ENST00000365165 102 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 RNU6-805P-201ENST00000365643 106 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 RNU6-395P-201ENST00000365662 106 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SF3B3Q15393 RNU6-842P-201ENST00000384269 107 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 RNY1P14-201ENST00000384426 108 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 RNU6-331P-201ENST00000384724 107 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 SNORD73A-201ENST00000386062 65 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 RNU6-1106P-201ENST00000390845 107 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 RNA5SP21-201ENST00000410917 96 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 AC243428.1-201ENST00000421099 264 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.49□□□□□ -1.85
SF3B3Q15393 FABP5P15-201ENST00000453566 214 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.49□□□□□ -1.85
SF3B3Q15393 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.49□□□□□ -1.85
SF3B3Q15393 HMGB1P30-201ENST00000492455 606 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms