Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 RNA5SP465-201ENST00000391195 109 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AL133475.1-201ENST00000404414 305 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 RNU2-8P-201ENST00000410727 190 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.17□□□□□ -2.22
FOXF1Q12946 Z99497.1-201ENST00000421282 135 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 EIF4EP2-201ENST00000422816 654 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 MTCYBP5-201ENST00000423752 1135 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 MTND4P20-201ENST00000424125 869 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 USP9YP18-201ENST00000425912 695 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.17□□□□□ -2.22
FOXF1Q12946 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.17□□□□□ -2.22
FOXF1Q12946 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.17□□□□□ -2.22
FOXF1Q12946 HSPE1P21-201ENST00000438283 308 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.17□□□□□ -2.22
FOXF1Q12946 AC245102.2-201ENST00000448956 180 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.17□□□□□ -2.22
FOXF1Q12946 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.17□□□□□ -2.22
FOXF1Q12946 SNRPFP4-201ENST00000456366 242 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AP000797.1-201ENST00000478870 387 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AP001025.1-201ENST00000486139 332 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AC010587.1-201ENST00000505809 469 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.17□□□□□ -2.22
FOXF1Q12946 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.17□□□□□ -2.22
FOXF1Q12946 AC008834.1-201ENST00000511612 175 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.17□□□□□ -2.22
FOXF1Q12946 AP001372.4-201ENST00000524889 472 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AP003072.2-201ENST00000527756 676 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 ADI1P3-201ENST00000549509 470 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.17□□□□□ -2.22
FOXF1Q12946 MIR4713-201ENST00000582691 75 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 BNIP3P25-201ENST00000596023 559 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 RPL30P11-203ENST00000598995 310 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 BNIP3P30-201ENST00000601184 574 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.17□□□□□ -2.22
FOXF1Q12946 ELOCP5-201ENST00000604924 333 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 NDUFA8P1-201ENST00000605525 367 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.17□□□□□ -2.22
FOXF1Q12946 uc_338.15-201ENST00000615470 191 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 RMST_4.1-201ENST00000616886 107 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 U6.42-201ENST00000618440 107 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.17□□□□□ -2.22
FOXF1Q12946 AC099654.13-201ENST00000639774 207 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
FOXF1Q12946 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
FOXF1Q12946 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
FOXF1Q12946 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.16□□□□□ -2.22
FOXF1Q12946 RPL23AP32-201ENST00000395315 459 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AL591034.2-201ENST00000402839 359 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 MRPL42P2-201ENST00000403169 426 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 RAP1BP3-201ENST00000407180 549 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 RNU2-23P-201ENST00000410545 195 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 RNU2-39P-201ENST00000410604 198 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.16□□□□□ -2.22
FOXF1Q12946 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.16□□□□□ -2.22
FOXF1Q12946 AC119618.1-201ENST00000434191 222 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.16□□□□□ -2.22
FOXF1Q12946 AL121594.1-201ENST00000475906 575 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AC108078.2-201ENST00000510750 236 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 RNU2-53P-201ENST00000516257 147 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 RNU6-685P-201ENST00000517088 95 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 RNU6-586P-201ENST00000517265 104 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.16□□□□□ -2.22
FOXF1Q12946 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.16□□□□□ -2.22
FOXF1Q12946 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.16□□□□□ -2.22
FOXF1Q12946 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.16□□□□□ -2.22
FOXF1Q12946 MIR3908-201ENST00000579798 126 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.16□□□□□ -2.22
FOXF1Q12946 AC112191.3-201ENST00000604371 277 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AC027449.1-201ENST00000608890 407 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AC093788.1-201ENST00000609356 927 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AL157834.3-201ENST00000615543 103 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AC099842.1-201ENST00000619919 596 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 AC138649.3-201ENST00000622154 254 ntBASIC1.16□□□□□ -2.22
FOXF1Q12946 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
FOXF1Q12946 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
FOXF1Q12946 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
FOXF1Q12946 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.15□□□□□ -2.22
FOXF1Q12946 RNA5SP432-201ENST00000362480 116 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 RNU1-23P-201ENST00000363361 144 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 SNORA72.3-201ENST00000365074 132 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 RNU6-611P-201ENST00000384276 104 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 MIR10A-201ENST00000385043 110 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 RPS3AP36-201ENST00000398190 775 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 CBX3P9-201ENST00000402326 552 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 RNU2-48P-201ENST00000410694 191 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
FOXF1Q12946 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.15□□□□□ -2.23
FOXF1Q12946 AL365400.1-201ENST00000431854 640 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.15□□□□□ -2.23
FOXF1Q12946 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.15□□□□□ -2.23
FOXF1Q12946 AC006512.1-201ENST00000468816 291 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.15□□□□□ -2.23
FOXF1Q12946 RPL30P6-201ENST00000475925 342 ntBASIC1.15□□□□□ -2.23
FOXF1Q12946 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.15□□□□□ -2.23
FOXF1Q12946 AC005178.1-201ENST00000508392 440 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms