Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC010095.1-201ENST00000443543 144 ntBASIC1.04□□□□□ -2.24
TPM4P67936 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM4P67936 AC021146.8-201ENST00000507455 733 ntBASIC1.04□□□□□ -2.24
TPM4P67936 RNA5SP490-201ENST00000517141 136 ntBASIC1.04□□□□□ -2.24
TPM4P67936 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
TPM4P67936 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM4P67936 AL512427.1-201ENST00000618593 349 ntBASIC1.04□□□□□ -2.24
TPM4P67936 SCARNA4-202ENST00000625402 129 ntBASIC1.04□□□□□ -2.24
TPM4P67936 MTND5P35-201ENST00000557537 1720 ntBASIC1.03□□□□□ -2.24
TPM4P67936 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
TPM4P67936 OR4G2P-201ENST00000328113 903 ntBASIC1.03□□□□□ -2.24
TPM4P67936 MIR520A-201ENST00000384862 85 ntBASIC1.03□□□□□ -2.24
TPM4P67936 SNORA17.3-201ENST00000391159 129 ntBASIC1.03□□□□□ -2.24
TPM4P67936 EBAG9P1-201ENST00000418955 543 ntBASIC1.03□□□□□ -2.24
TPM4P67936 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.03□□□□□ -2.24
TPM4P67936 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.03□□□□□ -2.24
TPM4P67936 RNA5SP269-201ENST00000459032 137 ntBASIC1.03□□□□□ -2.24
TPM4P67936 AC119751.4-201ENST00000507498 357 ntBASIC1.03□□□□□ -2.24
TPM4P67936 AC079395.1-201ENST00000510981 262 ntBASIC1.03□□□□□ -2.24
TPM4P67936 AC091163.3-201ENST00000518269 1144 ntBASIC1.03□□□□□ -2.24
TPM4P67936 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.03□□□□□ -2.24
TPM4P67936 HMGB1P33-201ENST00000563485 527 ntBASIC1.03□□□□□ -2.24
TPM4P67936 AL391001.1-201ENST00000602747 715 ntBASIC1.03□□□□□ -2.24
TPM4P67936 AL138889.2-201ENST00000603883 242 ntBASIC1.03□□□□□ -2.24
TPM4P67936 AC004492.1-201ENST00000607036 742 ntBASIC1.03□□□□□ -2.24
TPM4P67936 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.03□□□□□ -2.24
TPM4P67936 AC131235.4-201ENST00000609288 620 ntBASIC1.03□□□□□ -2.24
TPM4P67936 AC024940.5-201ENST00000622889 474 ntBASIC1.03□□□□□ -2.24
TPM4P67936 FRG1KP-201ENST00000623592 341 ntBASIC1.03□□□□□ -2.24
TPM4P67936 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
TPM4P67936 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TPM4P67936 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TPM4P67936 RNU6-190P-201ENST00000384154 102 ntBASIC1.02□□□□□ -2.25
TPM4P67936 RNU6-1065P-201ENST00000384513 106 ntBASIC1.02□□□□□ -2.25
TPM4P67936 MIR548B-201ENST00000385247 97 ntBASIC1.02□□□□□ -2.25
TPM4P67936 BTF3L4P1-201ENST00000413813 468 ntBASIC1.02□□□□□ -2.25
TPM4P67936 RPS25P9-201ENST00000435591 252 ntBASIC1.02□□□□□ -2.25
TPM4P67936 LARP1BP3-201ENST00000437229 869 ntBASIC1.02□□□□□ -2.25
TPM4P67936 PGBD4P5-201ENST00000445958 426 ntBASIC1.02□□□□□ -2.25
TPM4P67936 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM4P67936 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM4P67936 AC114982.1-201ENST00000469402 321 ntBASIC1.02□□□□□ -2.25
TPM4P67936 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM4P67936 MTND2P33-201ENST00000506452 1031 ntBASIC1.02□□□□□ -2.25
TPM4P67936 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM4P67936 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM4P67936 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM4P67936 LRRC6P1-201ENST00000532188 885 ntBASIC1.02□□□□□ -2.25
TPM4P67936 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.02□□□□□ -2.25
TPM4P67936 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.02□□□□□ -2.25
TPM4P67936 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.02□□□□□ -2.25
TPM4P67936 AL391516.1-201ENST00000554380 2449 ntBASIC1.02□□□□□ -2.25
TPM4P67936 NIFKP6-201ENST00000598115 845 ntBASIC1.02□□□□□ -2.25
TPM4P67936 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM4P67936 BNIP3P31-201ENST00000604515 566 ntBASIC1.02□□□□□ -2.25
TPM4P67936 MIR8065-201ENST00000620577 100 ntBASIC1.02□□□□□ -2.25
TPM4P67936 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.02□□□□□ -2.25
TPM4P67936 AC009033.1-201ENST00000624279 431 ntBASIC1.02□□□□□ -2.25
TPM4P67936 AC099654.5-201ENST00000636479 350 ntBASIC1.02□□□□□ -2.25
TPM4P67936 AC245060.5-201ENST00000610778 3293 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AC092104.1-201ENST00000497346 1441 ntBASIC1.01□□□□□ -2.25
TPM4P67936 RNU1-124P-201ENST00000363861 145 ntBASIC1.01□□□□□ -2.25
TPM4P67936 SNORA29-201ENST00000384183 140 ntBASIC1.01□□□□□ -2.25
TPM4P67936 MIR10A-201ENST00000385043 110 ntBASIC1.01□□□□□ -2.25
TPM4P67936 RNA5SP213-201ENST00000391031 106 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AC069282.1-201ENST00000411911 526 ntBASIC1.01□□□□□ -2.25
TPM4P67936 ELOCP17-201ENST00000414751 326 ntBASIC1.01□□□□□ -2.25
TPM4P67936 ELOCP9-201ENST00000418624 239 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.01□□□□□ -2.25
TPM4P67936 FTH1P25-201ENST00000447665 469 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AC006026.2-201ENST00000457376 180 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.01□□□□□ -2.25
TPM4P67936 SNORD116-28-201ENST00000516123 91 ntBASIC1.01□□□□□ -2.25
TPM4P67936 SNORA43.2-201ENST00000516652 128 ntBASIC1.01□□□□□ -2.25
TPM4P67936 RNU6-1092P-201ENST00000516955 87 ntBASIC1.01□□□□□ -2.25
TPM4P67936 RNA5SP437-201ENST00000517249 129 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.01□□□□□ -2.25
TPM4P67936 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.01□□□□□ -2.25
TPM4P67936 AC091135.1-201ENST00000585943 307 ntBASIC1.01□□□□□ -2.25
TPM4P67936 KC877982.1-201ENST00000602313 470 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AC013244.2-201ENST00000603396 103 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AL136363.2-201ENST00000604173 851 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.01□□□□□ -2.25
TPM4P67936 RMST_4.1-201ENST00000616886 107 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
TPM4P67936 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.01□□□□□ -2.25
TPM4P67936 RNU6-968P-201ENST00000384076 107 ntBASIC1□□□□□ -2.25
TPM4P67936 AL591806.2-201ENST00000433122 173 ntBASIC1□□□□□ -2.25
TPM4P67936 AL117351.1-201ENST00000438864 766 ntBASIC1□□□□□ -2.25
TPM4P67936 MTND1P30-201ENST00000441241 901 ntBASIC1□□□□□ -2.25
TPM4P67936 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1□□□□□ -2.25
TPM4P67936 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1□□□□□ -2.25
TPM4P67936 UBL5P1-201ENST00000507979 193 ntBASIC1□□□□□ -2.25
TPM4P67936 AC109445.1-201ENST00000512356 383 ntBASIC1□□□□□ -2.25
TPM4P67936 Y_RNA.687-201ENST00000516558 91 ntBASIC1□□□□□ -2.25
TPM4P67936 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1□□□□□ -2.25
TPM4P67936 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1□□□□□ -2.25
TPM4P67936 AC009712.1-201ENST00000564938 316 ntBASIC1□□□□□ -2.25
TPM4P67936 AL353778.1-201ENST00000603149 408 ntBASIC1□□□□□ -2.25
TPM4P67936 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms