Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNA5SP457-201ENST00000363657 124 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.86□□□□□ -2.55
RPL39P62891 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.86□□□□□ -2.55
RPL39P62891 MTATP6P16-201ENST00000434543 526 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.86□□□□□ -2.55
RPL39P62891 U7.7-201ENST00000459276 60 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 RN7SKP258-201ENST00000517151 304 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 AC109329.1-201ENST00000518744 317 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 AC026371.1-201ENST00000551867 419 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 AC112693.2-201ENST00000556538 232 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 AC011195.1-201ENST00000578177 177 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 AP005212.4-201ENST00000614206 710 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 AC008993.2-201ENST00000631744 806 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
RPL39P62891 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 RNU6-923P-201ENST00000364753 107 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 MIR194-1-201ENST00000384892 85 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 RNU6-821P-201ENST00000390995 107 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.87□□□□□ -2.55
RPL39P62891 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.87□□□□□ -2.55
RPL39P62891 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.87□□□□□ -2.55
RPL39P62891 AP002371.1-201ENST00000463604 433 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 RPL22P13-201ENST00000493291 347 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 RNF138P1-201ENST00000502765 546 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 LDHBP3-201ENST00000514909 822 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.87□□□□□ -2.55
RPL39P62891 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC-0.87□□□□□ -2.55
RPL39P62891 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.87□□□□□ -2.55
RPL39P62891 AC097065.2-201ENST00000608159 533 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 MIR8076-201ENST00000611401 83 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 AC007490.1-201ENST00000624321 703 ntBASIC-0.87□□□□□ -2.55
RPL39P62891 RNU2-48P-201ENST00000410694 191 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 RNA5SP111-201ENST00000411386 101 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 VPS26BP1-201ENST00000417155 755 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.88□□□□□ -2.55
RPL39P62891 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 BRK1P2-201ENST00000442875 223 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.88□□□□□ -2.55
RPL39P62891 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.88□□□□□ -2.55
RPL39P62891 DEFB108D-201ENST00000527787 222 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 MIR4743-201ENST00000584576 69 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 AC002545.1-201ENST00000592511 181 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 BNIP3P23-201ENST00000599655 511 ntBASIC-0.88□□□□□ -2.55
RPL39P62891 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.88□□□□□ -2.55
RPL39P62891 SNORA4.3-201ENST00000365564 137 ntBASIC-0.89□□□□□ -2.55
RPL39P62891 RNU6-882P-201ENST00000391025 103 ntBASIC-0.89□□□□□ -2.55
RPL39P62891 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.89□□□□□ -2.55
RPL39P62891 RPS26P48-201ENST00000491713 339 ntBASIC-0.89□□□□□ -2.55
RPL39P62891 AC114811.1-201ENST00000507207 168 ntBASIC-0.89□□□□□ -2.55
RPL39P62891 RNA5SP285-201ENST00000516619 119 ntBASIC-0.89□□□□□ -2.55
RPL39P62891 AC093027.1-201ENST00000546698 429 ntBASIC-0.89□□□□□ -2.55
RPL39P62891 RPL23AP91-201ENST00000569211 455 ntBASIC-0.89□□□□□ -2.55
RPL39P62891 MTND4LP5-201ENST00000605152 292 ntBASIC-0.89□□□□□ -2.55
RPL39P62891 AC093648.1-201ENST00000623546 606 ntBASIC-0.89□□□□□ -2.55
RPL39P62891 MTND2P41-201ENST00000637599 773 ntBASIC-0.89□□□□□ -2.55
RPL39P62891 CASC19-280ENST00000642102 1351 ntBASIC-0.9□□□□□ -2.55
RPL39P62891 RNU6-582P-201ENST00000362989 107 ntBASIC-0.9□□□□□ -2.55
RPL39P62891 SNORA51.6-201ENST00000384151 125 ntBASIC-0.9□□□□□ -2.55
RPL39P62891 RNU6-611P-201ENST00000384276 104 ntBASIC-0.9□□□□□ -2.55
RPL39P62891 AC099677.2-201ENST00000436385 175 ntBASIC-0.9□□□□□ -2.55
RPL39P62891 NFU1P2-201ENST00000448700 469 ntBASIC-0.9□□□□□ -2.55
RPL39P62891 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.9□□□□□ -2.55
RPL39P62891 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.9□□□□□ -2.55
RPL39P62891 AL049830.1-201ENST00000468034 425 ntBASIC-0.9□□□□□ -2.55
RPL39P62891 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.9□□□□□ -2.55
RPL39P62891 AL132657.2-201ENST00000564417 358 ntBASIC-0.9□□□□□ -2.55
RPL39P62891 MIR4802-201ENST00000581881 80 ntBASIC-0.9□□□□□ -2.55
RPL39P62891 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.9□□□□□ -2.55
RPL39P62891 AC096720.1-201ENST00000604441 183 ntBASIC-0.9□□□□□ -2.55
RPL39P62891 RNA5SP257-201ENST00000363023 116 ntBASIC-0.91□□□□□ -2.56
RPL39P62891 RNU6-217P-201ENST00000384164 104 ntBASIC-0.91□□□□□ -2.56
RPL39P62891 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.91□□□□□ -2.56
RPL39P62891 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.91□□□□□ -2.56
RPL39P62891 MTCO3P45-201ENST00000443036 613 ntBASIC-0.91□□□□□ -2.56
RPL39P62891 SNORA3.4-201ENST00000515969 96 ntBASIC-0.91□□□□□ -2.56
RPL39P62891 RNA5SP480-201ENST00000516840 109 ntBASIC-0.91□□□□□ -2.56
RPL39P62891 AC009268.1-201ENST00000561352 1203 ntBASIC-0.91□□□□□ -2.56
RPL39P62891 ROCK1P1-201ENST00000573767 549 ntBASIC-0.91□□□□□ -2.56
RPL39P62891 RNU6-756P-201ENST00000383997 107 ntBASIC-0.92□□□□□ -2.56
RPL39P62891 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.92□□□□□ -2.56
RPL39P62891 MIR196A2-201ENST00000385189 110 ntBASIC-0.92□□□□□ -2.56
RPL39P62891 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.92□□□□□ -2.56
RPL39P62891 AL441985.1-201ENST00000457727 251 ntBASIC-0.92□□□□□ -2.56
RPL39P62891 AL162395.1-201ENST00000457882 422 ntBASIC-0.92□□□□□ -2.56
RPL39P62891 AC114981.1-201ENST00000503897 678 ntBASIC-0.92□□□□□ -2.56
RPL39P62891 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.92□□□□□ -2.56
RPL39P62891 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.93□□□□□ -2.56
RPL39P62891 RNU6-793P-201ENST00000384233 104 ntBASIC-0.93□□□□□ -2.56
RPL39P62891 MIR548B-201ENST00000385247 97 ntBASIC-0.93□□□□□ -2.56
RPL39P62891 RNA5SP451-201ENST00000410588 110 ntBASIC-0.93□□□□□ -2.56
RPL39P62891 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.93□□□□□ -2.56
RPL39P62891 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.93□□□□□ -2.56
RPL39P62891 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.93□□□□□ -2.56
RPL39P62891 RNA5SP269-201ENST00000459032 137 ntBASIC-0.93□□□□□ -2.56
RPL39P62891 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.93□□□□□ -2.56
RPL39P62891 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms