Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU6-1032P-201ENST00000384100 107 ntBASIC2.38□□□□□ -2.03
LMO4P61968 RNU6-140P-201ENST00000384566 108 ntBASIC2.38□□□□□ -2.03
LMO4P61968 SNORA75.6-201ENST00000391318 127 ntBASIC2.38□□□□□ -2.03
LMO4P61968 AL031121.1-201ENST00000406553 254 ntBASIC2.38□□□□□ -2.03
LMO4P61968 MIR548F4-201ENST00000408515 105 ntBASIC2.38□□□□□ -2.03
LMO4P61968 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.38□□□□□ -2.03
LMO4P61968 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.38□□□□□ -2.03
LMO4P61968 HMGB1P27-201ENST00000431429 603 ntBASIC2.38□□□□□ -2.03
LMO4P61968 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.38□□□□□ -2.03
LMO4P61968 RPL21P41-201ENST00000459863 264 ntBASIC2.38□□□□□ -2.03
LMO4P61968 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.38□□□□□ -2.03
LMO4P61968 AC096745.1-201ENST00000509945 370 ntBASIC2.38□□□□□ -2.03
LMO4P61968 RNU6-914P-201ENST00000516749 109 ntBASIC2.38□□□□□ -2.03
LMO4P61968 AC087854.1-201ENST00000519706 414 ntBASIC2.38□□□□□ -2.03
LMO4P61968 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
LMO4P61968 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.38□□□□□ -2.03
LMO4P61968 AL117187.1-201ENST00000555482 181 ntBASIC2.38□□□□□ -2.03
LMO4P61968 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.38□□□□□ -2.03
LMO4P61968 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
LMO4P61968 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LMO4P61968 AC107294.3-201ENST00000609211 526 ntBASIC2.38□□□□□ -2.03
LMO4P61968 AC011890.2-201ENST00000613393 294 ntBASIC2.38□□□□□ -2.03
LMO4P61968 PISRT1.1-201ENST00000616930 107 ntBASIC2.38□□□□□ -2.03
LMO4P61968 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.38□□□□□ -2.03
LMO4P61968 MIR7153-201ENST00000637758 57 ntBASIC2.38□□□□□ -2.03
LMO4P61968 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.38□□□□□ -2.03
LMO4P61968 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.38□□□□□ -2.03
LMO4P61968 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
LMO4P61968 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LMO4P61968 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LMO4P61968 RNU1-105P-201ENST00000363470 161 ntBASIC2.37□□□□□ -2.03
LMO4P61968 Y_RNA.158-201ENST00000363651 101 ntBASIC2.37□□□□□ -2.03
LMO4P61968 RNU6-371P-201ENST00000364283 108 ntBASIC2.37□□□□□ -2.03
LMO4P61968 Y_RNA.252-201ENST00000364556 101 ntBASIC2.37□□□□□ -2.03
LMO4P61968 RNU6-196P-201ENST00000384315 107 ntBASIC2.37□□□□□ -2.03
LMO4P61968 Y_RNA.496-201ENST00000384444 101 ntBASIC2.37□□□□□ -2.03
LMO4P61968 Y_RNA.534-201ENST00000384599 112 ntBASIC2.37□□□□□ -2.03
LMO4P61968 MIR578-201ENST00000384828 96 ntBASIC2.37□□□□□ -2.03
LMO4P61968 MIR568-201ENST00000385036 95 ntBASIC2.37□□□□□ -2.03
LMO4P61968 MIR767-201ENST00000390228 109 ntBASIC2.37□□□□□ -2.03
LMO4P61968 MRPL42P3-201ENST00000401492 326 ntBASIC2.37□□□□□ -2.03
LMO4P61968 RNU6-985P-201ENST00000410182 104 ntBASIC2.37□□□□□ -2.03
LMO4P61968 RNA5SP184-201ENST00000411071 108 ntBASIC2.37□□□□□ -2.03
LMO4P61968 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.37□□□□□ -2.03
LMO4P61968 USP9YP30-201ENST00000430729 455 ntBASIC2.37□□□□□ -2.03
LMO4P61968 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.37□□□□□ -2.03
LMO4P61968 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.37□□□□□ -2.03
LMO4P61968 AL360271.2-201ENST00000447710 161 ntBASIC2.37□□□□□ -2.03
LMO4P61968 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.37□□□□□ -2.03
LMO4P61968 RNU7-23P-201ENST00000459465 62 ntBASIC2.37□□□□□ -2.03
LMO4P61968 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.37□□□□□ -2.03
LMO4P61968 RAC1P5-201ENST00000512182 576 ntBASIC2.37□□□□□ -2.03
LMO4P61968 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.37□□□□□ -2.03
LMO4P61968 AP003122.3-201ENST00000526316 255 ntBASIC2.37□□□□□ -2.03
LMO4P61968 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.37□□□□□ -2.03
LMO4P61968 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.37□□□□□ -2.03
LMO4P61968 AC079600.2-201ENST00000550076 130 ntBASIC2.37□□□□□ -2.03
LMO4P61968 AC026371.1-201ENST00000551867 419 ntBASIC2.37□□□□□ -2.03
LMO4P61968 MIR4319-201ENST00000577285 85 ntBASIC2.37□□□□□ -2.03
LMO4P61968 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.37□□□□□ -2.03
LMO4P61968 BNIP3P16-201ENST00000589779 534 ntBASIC2.37□□□□□ -2.03
LMO4P61968 AL161423.1-201ENST00000613700 262 ntBASIC2.37□□□□□ -2.03
LMO4P61968 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
LMO4P61968 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.37□□□□□ -2.03
LMO4P61968 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LMO4P61968 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
LMO4P61968 AP003122.5-201ENST00000527668 3766 ntBASIC2.37□□□□□ -2.03
LMO4P61968 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LMO4P61968 ZNF826P-207ENST00000622273 1910 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AC009487.2-201ENST00000420969 6821 ntBASIC2.36□□□□□ -2.03
LMO4P61968 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.36□□□□□ -2.03
LMO4P61968 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LMO4P61968 FTLP6-201ENST00000355274 422 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AC062016.1-201ENST00000355719 319 ntBASIC2.36□□□□□ -2.03
LMO4P61968 SNORD62.1-201ENST00000362541 86 ntBASIC2.36□□□□□ -2.03
LMO4P61968 RNU6-1059P-201ENST00000363752 98 ntBASIC2.36□□□□□ -2.03
LMO4P61968 Y_RNA.245-201ENST00000364493 95 ntBASIC2.36□□□□□ -2.03
LMO4P61968 Y_RNA.364-201ENST00000365532 101 ntBASIC2.36□□□□□ -2.03
LMO4P61968 RNU6-805P-201ENST00000365643 106 ntBASIC2.36□□□□□ -2.03
LMO4P61968 RNY1P14-201ENST00000384426 108 ntBASIC2.36□□□□□ -2.03
LMO4P61968 SNORA46-201ENST00000384762 135 ntBASIC2.36□□□□□ -2.03
LMO4P61968 RNA5SP354-201ENST00000391247 136 ntBASIC2.36□□□□□ -2.03
LMO4P61968 RNA5SP293-201ENST00000410527 113 ntBASIC2.36□□□□□ -2.03
LMO4P61968 RPL21P90-201ENST00000415692 466 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.36□□□□□ -2.03
LMO4P61968 NUP35P1-201ENST00000422734 947 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.36□□□□□ -2.03
LMO4P61968 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.36□□□□□ -2.03
LMO4P61968 AC108938.1-201ENST00000451204 136 ntBASIC2.36□□□□□ -2.03
LMO4P61968 GSTA11P-201ENST00000452866 669 ntBASIC2.36□□□□□ -2.03
LMO4P61968 RPL12P25-201ENST00000455592 494 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.36□□□□□ -2.03
LMO4P61968 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.36□□□□□ -2.03
LMO4P61968 SNORD5.1-201ENST00000458800 75 ntBASIC2.36□□□□□ -2.03
LMO4P61968 RNU7-187P-201ENST00000458985 68 ntBASIC2.36□□□□□ -2.03
LMO4P61968 MTATP8P1-201ENST00000467115 207 ntBASIC2.36□□□□□ -2.03
LMO4P61968 SUMO2P6-201ENST00000505273 288 ntBASIC2.36□□□□□ -2.03
LMO4P61968 MTND3P25-201ENST00000509243 135 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AC092436.3-201ENST00000511788 257 ntBASIC2.36□□□□□ -2.03
LMO4P61968 Y_RNA.661-201ENST00000516003 99 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms