Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL513043.1-201ENST00000439124 535 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 AC103975.1-201ENST00000482506 483 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC4P56524 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC4P56524 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.92□□□□□ -1.94
HDAC4P56524 RNU6-256P-201ENST00000516747 97 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 RNU7-30P-201ENST00000516835 62 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 AP005597.4-201ENST00000526762 229 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.92□□□□□ -1.94
HDAC4P56524 HPRT1P3-201ENST00000539521 576 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.92□□□□□ -1.94
HDAC4P56524 GLYCAM1-201ENST00000546596 285 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 MIR3162-201ENST00000581818 82 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 AL357078.3-201ENST00000607528 618 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 SCARNA4-202ENST00000625402 129 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 Z82195.2-201ENST00000612348 18351 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HDAC4P56524 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
HDAC4P56524 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC4P56524 Y_RNA.135-201ENST00000363439 95 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 SNORD113-7-201ENST00000363762 77 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 RNU6-1180P-201ENST00000364935 107 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 RNU6-72P-201ENST00000384285 79 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 RNU6-510P-201ENST00000391239 108 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 U3.37-201ENST00000408528 213 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 VN1R36P-201ENST00000414936 291 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.91□□□□□ -1.94
HDAC4P56524 SUMO1P4-201ENST00000429430 302 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.91□□□□□ -1.94
HDAC4P56524 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.91□□□□□ -1.94
HDAC4P56524 MRPL50P4-201ENST00000446432 475 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 AC092001.1-201ENST00000453012 261 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC4P56524 snoU109.2-201ENST00000459316 135 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 AC103851.1-201ENST00000506833 274 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.91□□□□□ -1.94
HDAC4P56524 AP000889.2-201ENST00000532684 490 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 AL121821.2-201ENST00000556081 394 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 AC103810.1-201ENST00000579873 453 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 AC005261.5-201ENST00000596280 355 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 AL138726.1-201ENST00000614873 333 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 Z69720.2-201ENST00000624755 279 ntBASIC2.91□□□□□ -1.94
HDAC4P56524 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC4P56524 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC4P56524 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.91□□□□□ -1.94
HDAC4P56524 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HDAC4P56524 MTND4P12-201ENST00000498999 1377 ntBASIC2.9□□□□□ -1.94
HDAC4P56524 MIR627-201ENST00000384979 97 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 MIR450B-201ENST00000401182 78 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 AL590004.2-201ENST00000404787 371 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 RN7SKP32-201ENST00000410167 303 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC4P56524 AMD1P1-201ENST00000457220 922 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC4P56524 Y_RNA.687-201ENST00000516558 91 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 SNORD19.2-201ENST00000516978 73 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 RNU6-323P-201ENST00000521915 107 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 AP004607.1-201ENST00000524456 203 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC4P56524 AC079600.2-201ENST00000550076 130 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.9□□□□□ -1.95
HDAC4P56524 MIR4446-201ENST00000578505 67 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 AC005046.1-201ENST00000608515 625 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC4P56524 Y_RNA.804-201ENST00000615262 101 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HDAC4P56524 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
HDAC4P56524 AC010889.1-201ENST00000566193 2666 ntBASIC2.9□□□□□ -1.95
HDAC4P56524 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
HDAC4P56524 Y_RNA.212-201ENST00000364177 102 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 SNORD73A-201ENST00000386062 65 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 RNU2-41P-201ENST00000410991 178 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.89□□□□□ -1.95
HDAC4P56524 AL161651.1-201ENST00000440882 223 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.89□□□□□ -1.95
HDAC4P56524 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC4P56524 RPL23AP70-201ENST00000483361 460 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 TRBVA-201ENST00000498804 316 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC4P56524 RPPH1-2P-201ENST00000516688 293 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 SNORA31.15-201ENST00000516771 132 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 COX6CP5-201ENST00000527162 228 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 RAB11AP2-201ENST00000545905 639 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC4P56524 MIR4435-1-201ENST00000582552 80 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.89□□□□□ -1.95
HDAC4P56524 ZNF861P-201ENST00000588126 639 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 AC023043.2-201ENST00000589678 1026 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 AL117336.2-201ENST00000602435 335 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 RNU6-85P-201ENST00000605989 107 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 AC093913.1-201ENST00000614178 329 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 RMST_7.1-201ENST00000621935 268 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 AC010297.1-201ENST00000623948 149 ntBASIC2.89□□□□□ -1.95
HDAC4P56524 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.88□□□□□ -1.95
HDAC4P56524 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.88□□□□□ -1.95
HDAC4P56524 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HDAC4P56524 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
HDAC4P56524 MIR26A1-201ENST00000362205 77 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-37P-201ENST00000362692 107 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms