Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SEPT14P19-203ENST00000633205 211 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 MIR449A-201ENST00000362113 91 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 RNU6-655P-201ENST00000362858 107 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 RNU4-48P-201ENST00000365559 182 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PKNOX1P55347 SNORA40.19-201ENST00000390846 128 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX1P55347 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX1P55347 PIGFP2-201ENST00000421400 651 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 MTCO2P34-201ENST00000421994 607 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX1P55347 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.81□□□□□ -2.12
PKNOX1P55347 MTND1P26-201ENST00000440488 538 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AC007969.2-201ENST00000441891 191 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 KATNBL1P3-201ENST00000443475 909 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AC006026.2-201ENST00000457376 180 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 PMCHL2-203ENST00000457791 237 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX1P55347 AC107393.1-201ENST00000512403 346 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AC074344.1-201ENST00000512823 224 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AC104136.1-201ENST00000512969 394 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.81□□□□□ -2.12
PKNOX1P55347 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX1P55347 RNU6-1178P-201ENST00000516674 107 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX1P55347 AC007375.1-201ENST00000554513 578 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX1P55347 AC121247.2-201ENST00000604776 136 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 ELOCP5-201ENST00000604924 333 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AL159153.1-201ENST00000619688 317 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 Z69720.2-201ENST00000624755 279 ntBASIC1.81□□□□□ -2.12
PKNOX1P55347 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PKNOX1P55347 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
PKNOX1P55347 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PKNOX1P55347 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.8□□□□□ -2.12
PKNOX1P55347 RNU6-1210P-201ENST00000363775 107 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 RNU5E-7P-201ENST00000365290 117 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 RNU6-348P-201ENST00000384386 107 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 RNU6-456P-201ENST00000384493 107 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 HMGN2P39-201ENST00000398005 273 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 AL512604.1-201ENST00000404812 257 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 BTF3L4P1-201ENST00000413813 468 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 TOMM20P4-201ENST00000427861 435 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.8□□□□□ -2.12
PKNOX1P55347 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.8□□□□□ -2.12
PKNOX1P55347 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.8□□□□□ -2.12
PKNOX1P55347 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.8□□□□□ -2.12
PKNOX1P55347 AL353752.1-201ENST00000454946 260 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 RPL30P12-201ENST00000474666 353 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 AC092436.1-201ENST00000506450 503 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.8□□□□□ -2.12
PKNOX1P55347 RNA5SP503-201ENST00000517047 117 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.8□□□□□ -2.12
PKNOX1P55347 AC007834.2-201ENST00000536310 343 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 NDUFA5P6-201ENST00000542110 379 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.8□□□□□ -2.12
PKNOX1P55347 MTND3P12-201ENST00000559068 328 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.8□□□□□ -2.12
PKNOX1P55347 MIR4703-201ENST00000577728 79 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 AC040904.1-201ENST00000590850 223 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.8□□□□□ -2.12
PKNOX1P55347 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.8□□□□□ -2.12
PKNOX1P55347 AC073114.1-201ENST00000612027 490 ntBASIC1.8□□□□□ -2.12
PKNOX1P55347 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.8□□□□□ -2.12
PKNOX1P55347 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PKNOX1P55347 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PKNOX1P55347 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PKNOX1P55347 RNU6-212P-201ENST00000362642 104 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 MIR634-201ENST00000385208 97 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 CBX3P9-201ENST00000402326 552 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 GSTA9P-201ENST00000406231 611 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 RN7SKP192-201ENST00000411291 327 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 RNA5SP508-201ENST00000411327 119 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AL358934.1-201ENST00000432346 324 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.79□□□□□ -2.12
PKNOX1P55347 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.79□□□□□ -2.12
PKNOX1P55347 USP9YP29-201ENST00000445112 563 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 MTND1P18-201ENST00000448191 573 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 C1DP4-201ENST00000455429 424 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 RPL38P4-201ENST00000502376 214 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.79□□□□□ -2.12
PKNOX1P55347 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.79□□□□□ -2.12
PKNOX1P55347 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.79□□□□□ -2.12
PKNOX1P55347 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.79□□□□□ -2.12
PKNOX1P55347 CYCSP27-201ENST00000527643 293 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.79□□□□□ -2.12
PKNOX1P55347 MIR4435-1-201ENST00000582552 80 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AL031274.2-201ENST00000599419 203 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AC008945.2-201ENST00000606056 604 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 Z82243.1-201ENST00000609432 473 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AC136475.10-201ENST00000620253 385 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AC097372.5-201ENST00000623665 376 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AC009161.2-201ENST00000624626 138 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 AC090517.3-201ENST00000625170 141 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 U4.7-201ENST00000638126 106 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PKNOX1P55347 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms