Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.51□□□□□ -2.01
CDH11P55287 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH11P55287 AC026464.5-201ENST00000562497 722 ntBASIC2.51□□□□□ -2.01
CDH11P55287 AC005730.3-201ENST00000583067 366 ntBASIC2.51□□□□□ -2.01
CDH11P55287 ELOCP29-201ENST00000588193 334 ntBASIC2.51□□□□□ -2.01
CDH11P55287 AC008121.1-201ENST00000603244 268 ntBASIC2.51□□□□□ -2.01
CDH11P55287 AC006023.1-201ENST00000603944 259 ntBASIC2.51□□□□□ -2.01
CDH11P55287 AP000787.2-201ENST00000604432 568 ntBASIC2.51□□□□□ -2.01
CDH11P55287 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH11P55287 AC005858.4-201ENST00000623191 700 ntBASIC2.51□□□□□ -2.01
CDH11P55287 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH11P55287 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CDH11P55287 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDH11P55287 RNU1-105P-201ENST00000363470 161 ntBASIC2.5□□□□□ -2.01
CDH11P55287 SNORD81.2-201ENST00000365153 76 ntBASIC2.5□□□□□ -2.01
CDH11P55287 RNU6-1280P-201ENST00000365211 107 ntBASIC2.5□□□□□ -2.01
CDH11P55287 RNU6-1329P-201ENST00000365664 107 ntBASIC2.5□□□□□ -2.01
CDH11P55287 RN7SKP32-201ENST00000410167 303 ntBASIC2.5□□□□□ -2.01
CDH11P55287 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH11P55287 AC004383.1-201ENST00000438135 289 ntBASIC2.5□□□□□ -2.01
CDH11P55287 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH11P55287 AC091951.2-201ENST00000500762 203 ntBASIC2.5□□□□□ -2.01
CDH11P55287 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH11P55287 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH11P55287 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH11P55287 RAC1P5-201ENST00000512182 576 ntBASIC2.5□□□□□ -2.01
CDH11P55287 ACA59.2-201ENST00000517061 156 ntBASIC2.5□□□□□ -2.01
CDH11P55287 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.5□□□□□ -2.01
CDH11P55287 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.5□□□□□ -2.01
CDH11P55287 AC025423.5-201ENST00000550230 219 ntBASIC2.5□□□□□ -2.01
CDH11P55287 AC007151.1-201ENST00000572774 483 ntBASIC2.5□□□□□ -2.01
CDH11P55287 OR1M4P-201ENST00000589199 287 ntBASIC2.5□□□□□ -2.01
CDH11P55287 AC020895.1-201ENST00000595362 272 ntBASIC2.5□□□□□ -2.01
CDH11P55287 AC064836.2-201ENST00000609491 462 ntBASIC2.5□□□□□ -2.01
CDH11P55287 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH11P55287 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH11P55287 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDH11P55287 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH11P55287 SNORD56.5-201ENST00000364281 72 ntBASIC2.49□□□□□ -2.01
CDH11P55287 RNA5SP139-201ENST00000364340 117 ntBASIC2.49□□□□□ -2.01
CDH11P55287 SNORD116-11-201ENST00000383882 92 ntBASIC2.49□□□□□ -2.01
CDH11P55287 SNORD21-201ENST00000383953 95 ntBASIC2.49□□□□□ -2.01
CDH11P55287 RNU6-128P-201ENST00000383976 107 ntBASIC2.49□□□□□ -2.01
CDH11P55287 SNORA18.3-201ENST00000384122 132 ntBASIC2.49□□□□□ -2.01
CDH11P55287 AL139095.1-201ENST00000404326 391 ntBASIC2.49□□□□□ -2.01
CDH11P55287 Y_RNA.604-201ENST00000410574 102 ntBASIC2.49□□□□□ -2.01
CDH11P55287 AC087499.2-201ENST00000432861 149 ntBASIC2.49□□□□□ -2.01
CDH11P55287 USP9YP8-201ENST00000441913 500 ntBASIC2.49□□□□□ -2.01
CDH11P55287 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH11P55287 MTND5P20-201ENST00000448677 143 ntBASIC2.49□□□□□ -2.01
CDH11P55287 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH11P55287 AMD1P1-201ENST00000457220 922 ntBASIC2.49□□□□□ -2.01
CDH11P55287 SEM1P1-201ENST00000506694 209 ntBASIC2.49□□□□□ -2.01
CDH11P55287 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH11P55287 RNU6-875P-201ENST00000516488 106 ntBASIC2.49□□□□□ -2.01
CDH11P55287 RNU7-30P-201ENST00000516835 62 ntBASIC2.49□□□□□ -2.01
CDH11P55287 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH11P55287 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.49□□□□□ -2.01
CDH11P55287 MIR4513-201ENST00000581077 86 ntBASIC2.49□□□□□ -2.01
CDH11P55287 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH11P55287 UBE2V2P2-201ENST00000587677 504 ntBASIC2.49□□□□□ -2.01
CDH11P55287 ELOCP5-201ENST00000604924 333 ntBASIC2.49□□□□□ -2.01
CDH11P55287 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CDH11P55287 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CDH11P55287 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDH11P55287 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CDH11P55287 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH11P55287 Y_RNA.184-201ENST00000363884 108 ntBASIC2.48□□□□□ -2.01
CDH11P55287 RNU5E-7P-201ENST00000365290 117 ntBASIC2.48□□□□□ -2.01
CDH11P55287 MIR767-201ENST00000390228 109 ntBASIC2.48□□□□□ -2.01
CDH11P55287 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CDH11P55287 RPS29P13-201ENST00000402041 169 ntBASIC2.48□□□□□ -2.01
CDH11P55287 FO393413.1-201ENST00000402892 195 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH11P55287 PTGES3P4-201ENST00000426243 356 ntBASIC2.48□□□□□ -2.01
CDH11P55287 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH11P55287 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH11P55287 MTND1P11-201ENST00000456661 876 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AP001025.1-201ENST00000486139 332 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AC008628.2-201ENST00000502605 298 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AC008526.1-201ENST00000509149 338 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AC114781.4-201ENST00000513707 639 ntBASIC2.48□□□□□ -2.01
CDH11P55287 RNU6-507P-201ENST00000516045 100 ntBASIC2.48□□□□□ -2.01
CDH11P55287 RNU6-1332P-201ENST00000516666 104 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AC109479.2-201ENST00000517842 174 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AC243972.3-201ENST00000539655 198 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AC009163.5-201ENST00000575421 637 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AC008739.2-201ENST00000597006 317 ntBASIC2.48□□□□□ -2.01
CDH11P55287 LARP7P1-201ENST00000605576 316 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AC009994.1-201ENST00000606889 253 ntBASIC2.48□□□□□ -2.01
CDH11P55287 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH11P55287 ZNF519P1-201ENST00000449011 1626 ntBASIC2.48□□□□□ -2.01
CDH11P55287 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH11P55287 AC099654.7-201ENST00000635788 2127 ntBASIC2.48□□□□□ -2.01
CDH11P55287 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH11P55287 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CDH11P55287 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH11P55287 RNU6-428P-201ENST00000362942 107 ntBASIC2.47□□□□□ -2.01
CDH11P55287 RNU6-105P-201ENST00000363909 104 ntBASIC2.47□□□□□ -2.01
CDH11P55287 Y_RNA.339-201ENST00000365325 102 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms