Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MTND1P20-201ENST00000430341 950 ntBASIC-0.65□□□□□ -2.51
BRCA2P51587 HMGB1P38-201ENST00000490557 577 ntBASIC-0.65□□□□□ -2.51
BRCA2P51587 HMGB1P30-201ENST00000492455 606 ntBASIC-0.65□□□□□ -2.51
BRCA2P51587 Z99571.1-201ENST00000636677 394 ntBASIC-0.65□□□□□ -2.51
BRCA2P51587 RNY4P28-201ENST00000365281 93 ntBASIC-0.65□□□□□ -2.51
BRCA2P51587 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.65□□□□□ -2.51
BRCA2P51587 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.65□□□□□ -2.51
BRCA2P51587 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.65□□□□□ -2.51
BRCA2P51587 AC114755.3-201ENST00000481111 251 ntBASIC-0.65□□□□□ -2.51
BRCA2P51587 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.65□□□□□ -2.51
BRCA2P51587 AC092809.3-201ENST00000415453 231 ntBASIC-0.66□□□□□ -2.51
BRCA2P51587 TRGV6-201ENST00000417928 299 ntBASIC-0.66□□□□□ -2.51
BRCA2P51587 AC023442.1-201ENST00000531247 422 ntBASIC-0.66□□□□□ -2.51
BRCA2P51587 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.66□□□□□ -2.51
BRCA2P51587 RNU6-747P-201ENST00000390928 104 ntBASIC-0.66□□□□□ -2.51
BRCA2P51587 RNU6-241P-201ENST00000391148 104 ntBASIC-0.66□□□□□ -2.51
BRCA2P51587 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.66□□□□□ -2.51
BRCA2P51587 AC025465.3-201ENST00000510570 311 ntBASIC-0.66□□□□□ -2.51
BRCA2P51587 AC074344.1-201ENST00000512823 224 ntBASIC-0.66□□□□□ -2.51
BRCA2P51587 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.66□□□□□ -2.51
BRCA2P51587 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.66□□□□□ -2.52
BRCA2P51587 MTND1P9-201ENST00000453775 944 ntBASIC-0.66□□□□□ -2.52
BRCA2P51587 AP001324.2-201ENST00000461163 319 ntBASIC-0.66□□□□□ -2.52
BRCA2P51587 AC015908.1-201ENST00000478739 476 ntBASIC-0.66□□□□□ -2.52
BRCA2P51587 MIR892C-201ENST00000516410 77 ntBASIC-0.66□□□□□ -2.52
BRCA2P51587 AP002004.2-201ENST00000531656 154 ntBASIC-0.66□□□□□ -2.52
BRCA2P51587 AC010186.2-204ENST00000537668 439 ntBASIC-0.66□□□□□ -2.52
BRCA2P51587 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.66□□□□□ -2.52
BRCA2P51587 AC012065.4-201ENST00000602445 679 ntBASIC-0.66□□□□□ -2.52
BRCA2P51587 RNU6-24P-201ENST00000384440 107 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 SNORD83B-201ENST00000386745 93 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 UBE2D3P2-201ENST00000424409 445 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 AC108729.1-201ENST00000487812 947 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 MIR302D-201ENST00000362275 68 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 SNORD1A-201ENST00000364968 72 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 AL365496.1-201ENST00000426885 215 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC-0.67□□□□□ -2.52
BRCA2P51587 RN7SKP5-201ENST00000517045 272 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC-0.67□□□□□ -2.52
BRCA2P51587 RNU6-950P-201ENST00000384651 107 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
BRCA2P51587 RPL23AP33-201ENST00000442301 452 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC-0.67□□□□□ -2.52
BRCA2P51587 RN7SKP88-201ENST00000516847 250 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC-0.67□□□□□ -2.52
BRCA2P51587 AC005261.5-201ENST00000596280 355 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 7SK.8-201ENST00000612110 250 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 7SK.11-201ENST00000615477 250 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 7SK.13-201ENST00000622040 250 ntBASIC-0.67□□□□□ -2.52
BRCA2P51587 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.67□□□□□ -2.52
BRCA2P51587 RNU6-756P-201ENST00000383997 107 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.68□□□□□ -2.52
BRCA2P51587 AC139712.2-201ENST00000424302 339 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 SNORA27.4-201ENST00000516650 95 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.68□□□□□ -2.52
BRCA2P51587 MIR3666-201ENST00000607845 111 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 RNU2-3P-201ENST00000410144 191 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.68□□□□□ -2.52
BRCA2P51587 AL606662.1-201ENST00000445763 553 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 BUD31P2-201ENST00000449374 300 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC-0.68□□□□□ -2.52
BRCA2P51587 AC012435.1-202ENST00000568772 240 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 AL356432.3-201ENST00000568952 465 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 AC105129.3-201ENST00000605455 485 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 RNU6-339P-201ENST00000384310 107 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 MIR496-201ENST00000385226 102 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.68□□□□□ -2.52
BRCA2P51587 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.68□□□□□ -2.52
BRCA2P51587 RN7SKP19-201ENST00000516016 252 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 SNRPGP20-201ENST00000604477 205 ntBASIC-0.68□□□□□ -2.52
BRCA2P51587 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC-0.69□□□□□ -2.52
BRCA2P51587 AC091860.1-201ENST00000505723 432 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 RNU6-863P-201ENST00000515989 104 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 AC022960.3-201ENST00000619794 441 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.69□□□□□ -2.52
BRCA2P51587 AC092268.1-201ENST00000342691 405 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
BRCA2P51587 FABP5P4-201ENST00000437203 171 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 BRK1P2-201ENST00000442875 223 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
BRCA2P51587 SNORD54-201ENST00000459159 67 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 AC107297.1-201ENST00000459991 176 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 AC010587.2-201ENST00000511727 448 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 FTX_3.1-201ENST00000610451 147 ntBASIC-0.69□□□□□ -2.52
BRCA2P51587 SNORA36.2-201ENST00000384004 127 ntBASIC-0.7□□□□□ -2.52
BRCA2P51587 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.7□□□□□ -2.52
BRCA2P51587 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.7□□□□□ -2.52
BRCA2P51587 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.7□□□□□ -2.52
BRCA2P51587 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.7□□□□□ -2.52
BRCA2P51587 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.7□□□□□ -2.52
BRCA2P51587 MIR4743-201ENST00000584576 69 ntBASIC-0.7□□□□□ -2.52
BRCA2P51587 MIR4436A-201ENST00000585278 85 ntBASIC-0.7□□□□□ -2.52
BRCA2P51587 AC105148.1-201ENST00000604961 409 ntBASIC-0.7□□□□□ -2.52
BRCA2P51587 AC091965.5-201ENST00000624785 342 ntBASIC-0.7□□□□□ -2.52
BRCA2P51587 RNU6-439P-201ENST00000384188 106 ntBASIC-0.7□□□□□ -2.52
BRCA2P51587 RPL21P32-201ENST00000419877 477 ntBASIC-0.7□□□□□ -2.52
BRCA2P51587 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms