Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC109635.3-201ENST00000529536 185 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.48□□□□□ -2.01
LHX1P48742 AC023050.3-201ENST00000541142 333 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AC090115.3-201ENST00000553218 849 ntBASIC2.48□□□□□ -2.01
LHX1P48742 OR11H5P-201ENST00000554039 926 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.48□□□□□ -2.01
LHX1P48742 RPS15AP11-201ENST00000594193 385 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AC021646.1-201ENST00000605469 484 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AL021997.1-201ENST00000605757 193 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.48□□□□□ -2.01
LHX1P48742 AC096772.1-201ENST00000609146 564 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AC068137.3-201ENST00000639191 341 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LHX1P48742 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LHX1P48742 Z75746.1-201ENST00000440243 2080 ntBASIC2.48□□□□□ -2.01
LHX1P48742 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.48□□□□□ -2.01
LHX1P48742 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LHX1P48742 RNU6-82P-201ENST00000363970 107 ntBASIC2.47□□□□□ -2.01
LHX1P48742 RNU6-1090P-201ENST00000364065 94 ntBASIC2.47□□□□□ -2.01
LHX1P48742 U8.8-201ENST00000365399 135 ntBASIC2.47□□□□□ -2.01
LHX1P48742 RNU4-20P-201ENST00000365601 151 ntBASIC2.47□□□□□ -2.01
LHX1P48742 Y_RNA.402-201ENST00000383972 102 ntBASIC2.47□□□□□ -2.01
LHX1P48742 RNU6-908P-201ENST00000410160 94 ntBASIC2.47□□□□□ -2.01
LHX1P48742 AC007064.1-201ENST00000412238 351 ntBASIC2.47□□□□□ -2.01
LHX1P48742 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.47□□□□□ -2.01
LHX1P48742 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.47□□□□□ -2.01
LHX1P48742 AC138623.1-201ENST00000418060 216 ntBASIC2.47□□□□□ -2.01
LHX1P48742 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.47□□□□□ -2.01
LHX1P48742 AC097463.2-201ENST00000421074 142 ntBASIC2.47□□□□□ -2.01
LHX1P48742 BX276092.3-201ENST00000424182 230 ntBASIC2.47□□□□□ -2.01
LHX1P48742 MTCO1P20-201ENST00000425366 358 ntBASIC2.47□□□□□ -2.01
LHX1P48742 AL356320.1-201ENST00000429616 163 ntBASIC2.47□□□□□ -2.01
LHX1P48742 C8orf59P1-201ENST00000429930 303 ntBASIC2.47□□□□□ -2.01
LHX1P48742 AP000705.1-201ENST00000454567 350 ntBASIC2.47□□□□□ -2.01
LHX1P48742 RPL21P99-201ENST00000480369 423 ntBASIC2.47□□□□□ -2.01
LHX1P48742 AC091885.1-201ENST00000506658 268 ntBASIC2.47□□□□□ -2.01
LHX1P48742 SNORA31.15-201ENST00000516771 132 ntBASIC2.47□□□□□ -2.01
LHX1P48742 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.47□□□□□ -2.01
LHX1P48742 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.47□□□□□ -2.01
LHX1P48742 VN1R80P-201ENST00000597126 338 ntBASIC2.47□□□□□ -2.01
LHX1P48742 AC123912.5-201ENST00000605470 343 ntBASIC2.47□□□□□ -2.01
LHX1P48742 DISC2.1-201ENST00000612827 205 ntBASIC2.47□□□□□ -2.01
LHX1P48742 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LHX1P48742 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
LHX1P48742 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.47□□□□□ -2.01
LHX1P48742 FER-210ENST00000628534 558 ntTSL 5 BASIC2.47□□□□□ -2.01
LHX1P48742 FO624990.1-201ENST00000636373 85 ntBASIC2.47□□□□□ -2.01
LHX1P48742 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.46□□□□□ -2.02
LHX1P48742 RNU4-12P-201ENST00000365233 139 ntBASIC2.46□□□□□ -2.02
LHX1P48742 RNU6-487P-201ENST00000365430 104 ntBASIC2.46□□□□□ -2.02
LHX1P48742 DEFA7P-201ENST00000382676 285 ntBASIC2.46□□□□□ -2.02
LHX1P48742 RNU2-25P-201ENST00000411041 191 ntBASIC2.46□□□□□ -2.02
LHX1P48742 POLHP1-201ENST00000411806 470 ntBASIC2.46□□□□□ -2.02
LHX1P48742 AC074117.2-201ENST00000417130 397 ntBASIC2.46□□□□□ -2.02
LHX1P48742 RPL30P4-201ENST00000429309 333 ntBASIC2.46□□□□□ -2.02
LHX1P48742 AP000852.1-201ENST00000472460 573 ntBASIC2.46□□□□□ -2.02
LHX1P48742 RPL7P43-201ENST00000478876 753 ntBASIC2.46□□□□□ -2.02
LHX1P48742 RN7SL429P-201ENST00000479090 223 ntBASIC2.46□□□□□ -2.02
LHX1P48742 RN7SL489P-201ENST00000486185 223 ntBASIC2.46□□□□□ -2.02
LHX1P48742 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.46□□□□□ -2.02
LHX1P48742 RN7SL327P-201ENST00000488659 223 ntBASIC2.46□□□□□ -2.02
LHX1P48742 RPL23AP49-201ENST00000492925 468 ntBASIC2.46□□□□□ -2.02
LHX1P48742 RPL38P4-201ENST00000502376 214 ntBASIC2.46□□□□□ -2.02
LHX1P48742 MTCYBP40-201ENST00000509390 1135 ntBASIC2.46□□□□□ -2.02
LHX1P48742 AC008549.1-201ENST00000512900 643 ntBASIC2.46□□□□□ -2.02
LHX1P48742 RNU6-189P-201ENST00000516120 101 ntBASIC2.46□□□□□ -2.02
LHX1P48742 SNORA31.23-201ENST00000517219 133 ntBASIC2.46□□□□□ -2.02
LHX1P48742 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.46□□□□□ -2.02
LHX1P48742 CYCSP27-201ENST00000527643 293 ntBASIC2.46□□□□□ -2.02
LHX1P48742 AC079598.5-201ENST00000547460 117 ntBASIC2.46□□□□□ -2.02
LHX1P48742 AL118558.2-201ENST00000556294 238 ntBASIC2.46□□□□□ -2.02
LHX1P48742 AL356575.1-201ENST00000603008 283 ntBASIC2.46□□□□□ -2.02
LHX1P48742 AC092747.3-201ENST00000603769 301 ntBASIC2.46□□□□□ -2.02
LHX1P48742 APOOP1-201ENST00000604695 592 ntBASIC2.46□□□□□ -2.02
LHX1P48742 AC013412.1-201ENST00000610687 192 ntBASIC2.46□□□□□ -2.02
LHX1P48742 RN7SL853P-201ENST00000617250 223 ntBASIC2.46□□□□□ -2.02
LHX1P48742 AC244517.12-201ENST00000623581 663 ntBASIC2.46□□□□□ -2.02
LHX1P48742 U4.7-201ENST00000638126 106 ntBASIC2.46□□□□□ -2.02
LHX1P48742 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
LHX1P48742 OR4G1P-203ENST00000641984 1631 ntBASIC2.46□□□□□ -2.02
LHX1P48742 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
LHX1P48742 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.45□□□□□ -2.02
LHX1P48742 ZNF658B-202ENST00000615961 3375 ntBASIC2.45□□□□□ -2.02
LHX1P48742 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
LHX1P48742 SNORD56.1-201ENST00000362913 68 ntBASIC2.45□□□□□ -2.02
LHX1P48742 SNORD114-19-201ENST00000363072 75 ntBASIC2.45□□□□□ -2.02
LHX1P48742 SNORA25.6-201ENST00000364121 118 ntBASIC2.45□□□□□ -2.02
LHX1P48742 Y_RNA.378-201ENST00000365652 113 ntBASIC2.45□□□□□ -2.02
LHX1P48742 RNU6-192P-201ENST00000391253 100 ntBASIC2.45□□□□□ -2.02
LHX1P48742 SNORA3.2-201ENST00000408221 125 ntBASIC2.45□□□□□ -2.02
LHX1P48742 RNA5SP425-201ENST00000410336 112 ntBASIC2.45□□□□□ -2.02
LHX1P48742 AF274854.1-201ENST00000413236 615 ntBASIC2.45□□□□□ -2.02
LHX1P48742 SNORD56-201ENST00000413522 71 ntBASIC2.45□□□□□ -2.02
LHX1P48742 Z98742.3-201ENST00000418637 326 ntBASIC2.45□□□□□ -2.02
LHX1P48742 ARL5AP1-201ENST00000418991 388 ntBASIC2.45□□□□□ -2.02
LHX1P48742 RPS15AP28-201ENST00000435088 386 ntBASIC2.45□□□□□ -2.02
LHX1P48742 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LHX1P48742 TRBV12-1-201ENST00000479785 344 ntBASIC2.45□□□□□ -2.02
LHX1P48742 AC018437.1-201ENST00000492214 406 ntBASIC2.45□□□□□ -2.02
LHX1P48742 Y_RNA.654-201ENST00000497848 106 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms