Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPL18AP17-201ENST00000455326 198 ntBASIC-0.14□□□□□ -2.43
HTTP42858 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.14□□□□□ -2.43
HTTP42858 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.14□□□□□ -2.43
HTTP42858 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.14□□□□□ -2.43
HTTP42858 RNA5SP227-201ENST00000516184 113 ntBASIC-0.14□□□□□ -2.43
HTTP42858 SNORA31.17-201ENST00000516953 127 ntBASIC-0.14□□□□□ -2.43
HTTP42858 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.14□□□□□ -2.43
HTTP42858 MIR3921-201ENST00000577308 85 ntBASIC-0.14□□□□□ -2.43
HTTP42858 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.14□□□□□ -2.43
HTTP42858 SNORA36.2-201ENST00000384004 127 ntBASIC-0.14□□□□□ -2.43
HTTP42858 RNU6V-201ENST00000384105 107 ntBASIC-0.14□□□□□ -2.43
HTTP42858 RNU6-360P-201ENST00000390944 104 ntBASIC-0.14□□□□□ -2.43
HTTP42858 AL355796.1-201ENST00000406706 323 ntBASIC-0.14□□□□□ -2.43
HTTP42858 RNA5SP100-201ENST00000410903 110 ntBASIC-0.14□□□□□ -2.43
HTTP42858 RNA5SP59-201ENST00000410922 110 ntBASIC-0.14□□□□□ -2.43
HTTP42858 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.14□□□□□ -2.43
HTTP42858 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.14□□□□□ -2.43
HTTP42858 MTND2P19-201ENST00000449129 1012 ntBASIC-0.14□□□□□ -2.43
HTTP42858 RPL26P26-201ENST00000480251 434 ntBASIC-0.14□□□□□ -2.43
HTTP42858 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-0.14□□□□□ -2.43
HTTP42858 RNF138P1-201ENST00000502765 546 ntBASIC-0.14□□□□□ -2.43
HTTP42858 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.14□□□□□ -2.43
HTTP42858 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.14□□□□□ -2.43
HTTP42858 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.14□□□□□ -2.43
HTTP42858 SCARNA3-201ENST00000517097 143 ntBASIC-0.14□□□□□ -2.43
HTTP42858 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.14□□□□□ -2.43
HTTP42858 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.14□□□□□ -2.43
HTTP42858 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.14□□□□□ -2.43
HTTP42858 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.14□□□□□ -2.43
HTTP42858 MTND4P20-201ENST00000424125 869 ntBASIC-0.15□□□□□ -2.43
HTTP42858 RAB11AP1-201ENST00000442978 646 ntBASIC-0.15□□□□□ -2.43
HTTP42858 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.15□□□□□ -2.43
HTTP42858 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC-0.15□□□□□ -2.43
HTTP42858 AL353691.1-201ENST00000451332 387 ntBASIC-0.15□□□□□ -2.43
HTTP42858 RPS3AP17-201ENST00000472594 777 ntBASIC-0.15□□□□□ -2.43
HTTP42858 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.15□□□□□ -2.43
HTTP42858 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.15□□□□□ -2.43
HTTP42858 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC-0.15□□□□□ -2.43
HTTP42858 ZNF92P3-201ENST00000596594 954 ntBASIC-0.15□□□□□ -2.43
HTTP42858 AL365434.2-201ENST00000607979 234 ntBASIC-0.15□□□□□ -2.43
HTTP42858 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.15□□□□□ -2.43
HTTP42858 FABP5P14-201ENST00000437273 393 ntBASIC-0.15□□□□□ -2.43
HTTP42858 AC104332.1-201ENST00000440471 797 ntBASIC-0.15□□□□□ -2.43
HTTP42858 AC111193.1-201ENST00000504097 155 ntBASIC-0.15□□□□□ -2.43
HTTP42858 AC009268.1-201ENST00000561352 1203 ntBASIC-0.15□□□□□ -2.43
HTTP42858 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.15□□□□□ -2.43
HTTP42858 AP003465.2-201ENST00000602571 373 ntBASIC-0.15□□□□□ -2.43
HTTP42858 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.15□□□□□ -2.43
HTTP42858 MIR8064-201ENST00000612863 90 ntBASIC-0.15□□□□□ -2.43
HTTP42858 AC090116.1-201ENST00000615679 446 ntBASIC-0.15□□□□□ -2.43
HTTP42858 7SK.10-201ENST00000621414 298 ntBASIC-0.15□□□□□ -2.43
HTTP42858 SNORA29-201ENST00000384183 140 ntBASIC-0.16□□□□□ -2.43
HTTP42858 SNORD14D-201ENST00000384390 87 ntBASIC-0.16□□□□□ -2.43
HTTP42858 AC119751.3-201ENST00000399720 670 ntBASIC-0.16□□□□□ -2.43
HTTP42858 MIR1290-201ENST00000408735 78 ntBASIC-0.16□□□□□ -2.43
HTTP42858 RNU6-233P-201ENST00000410845 141 ntBASIC-0.16□□□□□ -2.43
HTTP42858 AC114482.1-201ENST00000418010 247 ntBASIC-0.16□□□□□ -2.43
HTTP42858 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.16□□□□□ -2.43
HTTP42858 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.16□□□□□ -2.43
HTTP42858 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.16□□□□□ -2.43
HTTP42858 SNORA40.12-201ENST00000516329 111 ntBASIC-0.16□□□□□ -2.43
HTTP42858 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.16□□□□□ -2.43
HTTP42858 RNA5SP503-201ENST00000517047 117 ntBASIC-0.16□□□□□ -2.43
HTTP42858 COPS8P3-201ENST00000526024 482 ntBASIC-0.16□□□□□ -2.43
HTTP42858 ZNF705CP-201ENST00000530515 889 ntBASIC-0.16□□□□□ -2.43
HTTP42858 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.16□□□□□ -2.43
HTTP42858 RNU4-79P-201ENST00000362764 141 ntBASIC-0.16□□□□□ -2.43
HTTP42858 SNORD114-24-201ENST00000365029 72 ntBASIC-0.16□□□□□ -2.43
HTTP42858 RNY1P8-201ENST00000383970 114 ntBASIC-0.16□□□□□ -2.43
HTTP42858 RNA5SP496-201ENST00000391240 109 ntBASIC-0.16□□□□□ -2.43
HTTP42858 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.16□□□□□ -2.43
HTTP42858 RAC1P6-201ENST00000423911 575 ntBASIC-0.16□□□□□ -2.43
HTTP42858 HSPE1P9-201ENST00000440046 311 ntBASIC-0.16□□□□□ -2.43
HTTP42858 AL606662.1-201ENST00000445763 553 ntBASIC-0.16□□□□□ -2.43
HTTP42858 AL031313.1-201ENST00000448435 256 ntBASIC-0.16□□□□□ -2.43
HTTP42858 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.16□□□□□ -2.43
HTTP42858 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC-0.16□□□□□ -2.43
HTTP42858 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.16□□□□□ -2.43
HTTP42858 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.16□□□□□ -2.43
HTTP42858 AC069304.2-201ENST00000605154 435 ntBASIC-0.16□□□□□ -2.43
HTTP42858 AC112220.3-201ENST00000605502 502 ntBASIC-0.16□□□□□ -2.43
HTTP42858 AL360219.1-201ENST00000610230 366 ntBASIC-0.16□□□□□ -2.43
HTTP42858 RMST_4.1-201ENST00000616886 107 ntBASIC-0.16□□□□□ -2.43
HTTP42858 AL133370.2-201ENST00000619934 439 ntBASIC-0.16□□□□□ -2.43
HTTP42858 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.43
HTTP42858 SNORA36.1-201ENST00000363424 132 ntBASIC-0.16□□□□□ -2.44
HTTP42858 RNU6-270P-201ENST00000364131 105 ntBASIC-0.16□□□□□ -2.44
HTTP42858 RNU6-969P-201ENST00000383900 105 ntBASIC-0.16□□□□□ -2.44
HTTP42858 AC016909.1-201ENST00000415916 166 ntBASIC-0.16□□□□□ -2.44
HTTP42858 BEND7P1-201ENST00000422058 457 ntBASIC-0.16□□□□□ -2.44
HTTP42858 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.16□□□□□ -2.44
HTTP42858 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.16□□□□□ -2.44
HTTP42858 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.16□□□□□ -2.44
HTTP42858 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
HTTP42858 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.17□□□□□ -2.44
HTTP42858 AL714022.1-201ENST00000439897 151 ntBASIC-0.17□□□□□ -2.44
HTTP42858 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.17□□□□□ -2.44
HTTP42858 MTCO3P10-201ENST00000455912 772 ntBASIC-0.17□□□□□ -2.44
HTTP42858 AC116337.2-201ENST00000477662 156 ntBASIC-0.17□□□□□ -2.44
HTTP42858 HMGN1P12-201ENST00000499125 195 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms