Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
HADHAP40939 VN1R80P-201ENST00000597126 338 ntBASIC2.67□□□□□ -1.98
HADHAP40939 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.67□□□□□ -1.98
HADHAP40939 AC062016.1-201ENST00000355719 319 ntBASIC2.66□□□□□ -1.98
HADHAP40939 Y_RNA.6-201ENST00000362350 114 ntBASIC2.66□□□□□ -1.98
HADHAP40939 SNORD56.1-201ENST00000362913 68 ntBASIC2.66□□□□□ -1.98
HADHAP40939 Y_RNA.231-201ENST00000364358 102 ntBASIC2.66□□□□□ -1.98
HADHAP40939 RNU1-52P-201ENST00000384190 164 ntBASIC2.66□□□□□ -1.98
HADHAP40939 RNU6-1106P-201ENST00000390845 107 ntBASIC2.66□□□□□ -1.98
HADHAP40939 AL360182.1-201ENST00000397433 468 ntBASIC2.66□□□□□ -1.98
HADHAP40939 RNU6-908P-201ENST00000410160 94 ntBASIC2.66□□□□□ -1.98
HADHAP40939 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.66□□□□□ -1.98
HADHAP40939 USP9YP27-201ENST00000418455 438 ntBASIC2.66□□□□□ -1.98
HADHAP40939 SNRPEP10-201ENST00000420249 274 ntBASIC2.66□□□□□ -1.98
HADHAP40939 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.66□□□□□ -1.98
HADHAP40939 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.66□□□□□ -1.98
HADHAP40939 AC007969.2-201ENST00000441891 191 ntBASIC2.66□□□□□ -1.98
HADHAP40939 MTND3P16-201ENST00000452205 344 ntBASIC2.66□□□□□ -1.98
HADHAP40939 AP000705.1-201ENST00000454567 350 ntBASIC2.66□□□□□ -1.98
HADHAP40939 AP000852.1-201ENST00000472460 573 ntBASIC2.66□□□□□ -1.98
HADHAP40939 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.66□□□□□ -1.98
HADHAP40939 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.66□□□□□ -1.98
HADHAP40939 RN7SKP132-201ENST00000516001 208 ntBASIC2.66□□□□□ -1.98
HADHAP40939 MTND1P5-201ENST00000517906 940 ntBASIC2.66□□□□□ -1.98
HADHAP40939 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.66□□□□□ -1.98
HADHAP40939 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.66□□□□□ -1.98
HADHAP40939 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.66□□□□□ -1.98
HADHAP40939 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.66□□□□□ -1.98
HADHAP40939 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.66□□□□□ -1.98
HADHAP40939 TPRKBP2-201ENST00000565969 475 ntBASIC2.66□□□□□ -1.98
HADHAP40939 MIR4319-201ENST00000577285 85 ntBASIC2.66□□□□□ -1.98
HADHAP40939 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.66□□□□□ -1.98
HADHAP40939 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.66□□□□□ -1.98
HADHAP40939 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.66□□□□□ -1.98
HADHAP40939 AC121333.1-201ENST00000567488 2709 ntBASIC2.66□□□□□ -1.98
HADHAP40939 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.66□□□□□ -1.98
HADHAP40939 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
HADHAP40939 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HADHAP40939 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HADHAP40939 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.65□□□□□ -1.98
HADHAP40939 RNY4P14-201ENST00000363656 96 ntBASIC2.65□□□□□ -1.99
HADHAP40939 Y_RNA.573-201ENST00000384763 105 ntBASIC2.65□□□□□ -1.99
HADHAP40939 MIR186-201ENST00000384988 86 ntBASIC2.65□□□□□ -1.99
HADHAP40939 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.65□□□□□ -1.99
HADHAP40939 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.65□□□□□ -1.99
HADHAP40939 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.65□□□□□ -1.99
HADHAP40939 RNU6-1208P-201ENST00000459588 107 ntBASIC2.65□□□□□ -1.99
HADHAP40939 RPL21P99-201ENST00000480369 423 ntBASIC2.65□□□□□ -1.99
HADHAP40939 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.65□□□□□ -1.99
HADHAP40939 SNORA31.15-201ENST00000516771 132 ntBASIC2.65□□□□□ -1.99
HADHAP40939 AC087854.1-201ENST00000519706 414 ntBASIC2.65□□□□□ -1.99
HADHAP40939 AK6P1-201ENST00000540219 478 ntBASIC2.65□□□□□ -1.99
HADHAP40939 AL133241.1-201ENST00000556832 487 ntBASIC2.65□□□□□ -1.99
HADHAP40939 AC092747.3-201ENST00000603769 301 ntBASIC2.65□□□□□ -1.99
HADHAP40939 AL356157.2-201ENST00000605122 111 ntBASIC2.65□□□□□ -1.99
HADHAP40939 AF250324.2-201ENST00000608299 610 ntBASIC2.65□□□□□ -1.99
HADHAP40939 U4atac.1-201ENST00000618345 95 ntBASIC2.65□□□□□ -1.99
HADHAP40939 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HADHAP40939 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
HADHAP40939 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.65□□□□□ -1.99
HADHAP40939 OR4G1P-203ENST00000641984 1631 ntBASIC2.64□□□□□ -1.99
HADHAP40939 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HADHAP40939 RNU6-859P-201ENST00000362728 107 ntBASIC2.64□□□□□ -1.99
HADHAP40939 RNY3P3-201ENST00000363816 102 ntBASIC2.64□□□□□ -1.99
HADHAP40939 RNU6-1222P-201ENST00000384615 107 ntBASIC2.64□□□□□ -1.99
HADHAP40939 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HADHAP40939 RPS29P13-201ENST00000402041 169 ntBASIC2.64□□□□□ -1.99
HADHAP40939 AL117339.3-201ENST00000418733 162 ntBASIC2.64□□□□□ -1.99
HADHAP40939 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.64□□□□□ -1.99
HADHAP40939 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.64□□□□□ -1.99
HADHAP40939 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.64□□□□□ -1.99
HADHAP40939 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.64□□□□□ -1.99
HADHAP40939 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.64□□□□□ -1.99
HADHAP40939 TBCAP3-201ENST00000512475 312 ntBASIC2.64□□□□□ -1.99
HADHAP40939 AC096725.1-201ENST00000514266 313 ntBASIC2.64□□□□□ -1.99
HADHAP40939 AC115990.1-201ENST00000526957 301 ntBASIC2.64□□□□□ -1.99
HADHAP40939 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.64□□□□□ -1.99
HADHAP40939 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.64□□□□□ -1.99
HADHAP40939 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.64□□□□□ -1.99
HADHAP40939 AC123912.5-201ENST00000605470 343 ntBASIC2.64□□□□□ -1.99
HADHAP40939 AC008121.3-201ENST00000618726 433 ntBASIC2.64□□□□□ -1.99
HADHAP40939 AC010297.1-201ENST00000623948 149 ntBASIC2.64□□□□□ -1.99
HADHAP40939 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.64□□□□□ -1.99
HADHAP40939 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HADHAP40939 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
HADHAP40939 RNU6-655P-201ENST00000362858 107 ntBASIC2.63□□□□□ -1.99
HADHAP40939 RNU6-1210P-201ENST00000363775 107 ntBASIC2.63□□□□□ -1.99
HADHAP40939 SNORA25.6-201ENST00000364121 118 ntBASIC2.63□□□□□ -1.99
HADHAP40939 RNU4-20P-201ENST00000365601 151 ntBASIC2.63□□□□□ -1.99
HADHAP40939 Y_RNA.516-201ENST00000384541 124 ntBASIC2.63□□□□□ -1.99
HADHAP40939 MIR524-201ENST00000385242 87 ntBASIC2.63□□□□□ -1.99
HADHAP40939 RNU6-780P-201ENST00000391030 104 ntBASIC2.63□□□□□ -1.99
HADHAP40939 EIF4E2P1-201ENST00000393781 255 ntBASIC2.63□□□□□ -1.99
HADHAP40939 AL356057.3-201ENST00000402607 340 ntBASIC2.63□□□□□ -1.99
HADHAP40939 MTCO1P21-201ENST00000416634 589 ntBASIC2.63□□□□□ -1.99
HADHAP40939 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.63□□□□□ -1.99
HADHAP40939 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.63□□□□□ -1.99
HADHAP40939 MTCO1P20-201ENST00000425366 358 ntBASIC2.63□□□□□ -1.99
HADHAP40939 ERLEC1P1-201ENST00000433806 578 ntBASIC2.63□□□□□ -1.99
HADHAP40939 RPS12P2-201ENST00000439728 269 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms