Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC026271.5-201ENST00000577873 130 ntBASIC2.06□□□□□ -2.08
PTPN6P29350 AC025811.1-201ENST00000604312 472 ntBASIC2.06□□□□□ -2.08
PTPN6P29350 AL670379.2-201ENST00000604983 252 ntBASIC2.06□□□□□ -2.08
PTPN6P29350 AC007792.1-201ENST00000623023 402 ntBASIC2.06□□□□□ -2.08
PTPN6P29350 AC090517.3-201ENST00000625170 141 ntBASIC2.06□□□□□ -2.08
PTPN6P29350 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.06□□□□□ -2.08
PTPN6P29350 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.06□□□□□ -2.08
PTPN6P29350 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.05□□□□□ -2.08
PTPN6P29350 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
PTPN6P29350 RNU6-1159P-201ENST00000362933 107 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 RNU6-527P-201ENST00000363425 104 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 Y_RNA.324-201ENST00000365165 102 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PTPN6P29350 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 RNU2-23P-201ENST00000410545 195 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 RN7SKP223-201ENST00000410582 62 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.05□□□□□ -2.08
PTPN6P29350 AL139415.2-201ENST00000431968 163 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 AL591043.1-201ENST00000432461 424 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.05□□□□□ -2.08
PTPN6P29350 snoU13.26-201ENST00000459452 105 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 RPL30P12-201ENST00000474666 353 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 AC079382.1-201ENST00000493346 557 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 RPS29P21-201ENST00000496272 170 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 AC010493.1-201ENST00000513479 292 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 LRRC34P2-201ENST00000514850 553 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.05□□□□□ -2.08
PTPN6P29350 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.05□□□□□ -2.08
PTPN6P29350 AC025449.1-201ENST00000603896 529 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 AL162373.1-201ENST00000620433 407 ntBASIC2.05□□□□□ -2.08
PTPN6P29350 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.04□□□□□ -2.08
PTPN6P29350 RNU6-1120P-201ENST00000362988 108 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 RNU6-393P-201ENST00000384475 107 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 AL591034.2-201ENST00000402839 359 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 AL512604.1-201ENST00000404812 257 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 MTATP6P18-201ENST00000417994 673 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.04□□□□□ -2.08
PTPN6P29350 AL669831.1-202ENST00000428504 417 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 GTF2IP13-201ENST00000438487 386 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 DNAJC19P4-201ENST00000440115 345 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.04□□□□□ -2.08
PTPN6P29350 MTCYBP40-201ENST00000509390 1135 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 MTCO3P7-201ENST00000510008 774 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 AL356057.1-201ENST00000533798 831 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 IMMP1LP2-201ENST00000552954 492 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.04□□□□□ -2.08
PTPN6P29350 AC026464.5-201ENST00000562497 722 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 MIR1273D-201ENST00000577266 86 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.04□□□□□ -2.08
PTPN6P29350 AC119751.7-201ENST00000600494 245 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 AC073648.5-201ENST00000603502 305 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 Z69720.2-201ENST00000624755 279 ntBASIC2.04□□□□□ -2.08
PTPN6P29350 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PTPN6P29350 AC002543.1-201ENST00000299783 1954 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.03□□□□□ -2.08
PTPN6P29350 ZNF680P1-201ENST00000436625 1469 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PTPN6P29350 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PTPN6P29350 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
PTPN6P29350 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PTPN6P29350 Y_RNA.77-201ENST00000362962 107 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 RNU1-23P-201ENST00000363361 144 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 RNU6-1210P-201ENST00000363775 107 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 RNU6-1303P-201ENST00000364841 107 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 SNORA25B-201ENST00000365507 128 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 SNORA75-201ENST00000384158 137 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 RNU6-434P-201ENST00000384376 107 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 HMGB3P2-201ENST00000411913 584 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 BTF3L4P1-201ENST00000413813 468 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.03□□□□□ -2.08
PTPN6P29350 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.03□□□□□ -2.08
PTPN6P29350 RPL23AP7-203ENST00000449021 469 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 GMFBP1-201ENST00000467831 427 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 AL121594.1-201ENST00000475906 575 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.03□□□□□ -2.08
PTPN6P29350 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.03□□□□□ -2.08
PTPN6P29350 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 AC092436.1-201ENST00000506450 503 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.03□□□□□ -2.08
PTPN6P29350 SNORA4.4-201ENST00000515921 135 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 Y_RNA.688-201ENST00000516565 95 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.03□□□□□ -2.08
PTPN6P29350 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 MIR4648-201ENST00000580107 72 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 AL031274.2-201ENST00000599419 203 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 AC005034.5-201ENST00000604219 466 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
PTPN6P29350 AC091834.1-201ENST00000614543 472 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.03□□□□□ -2.08
PTPN6P29350 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
PTPN6P29350 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
PTPN6P29350 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.02□□□□□ -2.09
PTPN6P29350 MTND4P14-201ENST00000435799 1354 ntBASIC2.02□□□□□ -2.09
PTPN6P29350 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PTPN6P29350 RNU6-37P-201ENST00000362692 107 ntBASIC2.02□□□□□ -2.09
PTPN6P29350 RNU6-11P-201ENST00000364234 107 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms