Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.82-201ENST00000363000 102 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.92-201ENST00000363043 102 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.235-201ENST00000364412 102 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.240-201ENST00000364469 95 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.306-201ENST00000365015 102 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.312-201ENST00000365089 102 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.322-201ENST00000365151 102 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Z98749.2-208ENST00000381646 500 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.446-201ENST00000384178 104 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 RNU6-541P-201ENST00000384709 110 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 MIR490-201ENST00000384865 128 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 AL451074.5-201ENST00000415894 435 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPRAP18433 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPRAP18433 Z82210.1-201ENST00000440037 231 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.38□□□□□ -1.71
PTPRAP18433 SNORD105B-201ENST00000458770 79 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.650-201ENST00000459002 102 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 AP001025.1-201ENST00000486139 332 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 AC025554.1-201ENST00000505641 188 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 RN7SKP49-201ENST00000516675 260 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 RNU6-567P-201ENST00000516746 107 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.777-201ENST00000516982 102 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 AP004607.1-201ENST00000524456 203 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPRAP18433 MIR3144-201ENST00000579460 79 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 MIR5695-201ENST00000579717 85 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.771-201ENST00000598668 102 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 AC005296.1-201ENST00000616145 209 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPRAP18433 Y_RNA.789-201ENST00000622480 102 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPRAP18433 IGHVIII-44-202ENST00000636235 289 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.38□□□□□ -1.71
PTPRAP18433 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRAP18433 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRAP18433 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPRAP18433 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRAP18433 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PTPRAP18433 BX322639.1-202ENST00000423987 2213 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRAP18433 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPRAP18433 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPRAP18433 SNORA29-201ENST00000384183 140 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 Y_RNA.570-201ENST00000384750 101 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 MIR10B-201ENST00000385011 110 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPRAP18433 CYCSP4-201ENST00000429682 331 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPRAP18433 AP001324.2-201ENST00000461163 319 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 AC117440.1-201ENST00000474107 571 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPRAP18433 SNORA31.8-201ENST00000516327 108 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 RNU6-1183P-201ENST00000517054 60 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.37□□□□□ -1.71
PTPRAP18433 MRPS18CP4-201ENST00000535821 231 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 AC069240.1-201ENST00000548774 375 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.37□□□□□ -1.71
PTPRAP18433 AC027288.2-201ENST00000553028 243 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPRAP18433 AC008749.1-201ENST00000597650 306 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPRAP18433 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPRAP18433 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRAP18433 AL353743.1-202ENST00000431724 1695 ntBASIC4.37□□□□□ -1.71
PTPRAP18433 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRAP18433 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPRAP18433 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPRAP18433 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPRAP18433 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPRAP18433 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPRAP18433 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPRAP18433 ZNF962P-201ENST00000443465 3140 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPRAP18433 MIR410-201ENST00000362222 80 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 RNU6-626P-201ENST00000363354 107 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 RNA5SP267-201ENST00000364893 126 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 Y_RNA.304-201ENST00000365011 112 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 RNU6-898P-201ENST00000365627 104 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 RNU6-20P-201ENST00000384106 107 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 RNU6-1289P-201ENST00000384431 106 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 MIR487A-201ENST00000385009 80 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 RNU6-1001P-201ENST00000411265 100 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPRAP18433 WARS2P1-201ENST00000429678 537 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 MTCO1P5-201ENST00000433573 344 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 AC069285.2-201ENST00000440210 275 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 AC009237.8-201ENST00000445492 379 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPRAP18433 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPRAP18433 RNY3P16-201ENST00000516338 101 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 RPL21P9-201ENST00000556149 474 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 UBL5P4-201ENST00000562584 236 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPRAP18433 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPRAP18433 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPRAP18433 AC020895.1-201ENST00000595362 272 ntBASIC4.36□□□□□ -1.71
PTPRAP18433 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 217.2 ms