Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.75□□□□□ -2.13
NCK1P16333 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.75□□□□□ -2.13
NCK1P16333 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.75□□□□□ -2.13
NCK1P16333 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.75□□□□□ -2.13
NCK1P16333 AC009063.1-201ENST00000563342 702 ntBASIC1.75□□□□□ -2.13
NCK1P16333 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
NCK1P16333 MIR4775-201ENST00000581168 75 ntBASIC1.75□□□□□ -2.13
NCK1P16333 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.75□□□□□ -2.13
NCK1P16333 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.75□□□□□ -2.13
NCK1P16333 AC087241.4-201ENST00000612441 480 ntBASIC1.75□□□□□ -2.13
NCK1P16333 AC011155.2-201ENST00000623202 216 ntBASIC1.75□□□□□ -2.13
NCK1P16333 AF246928.1-201ENST00000623768 87 ntBASIC1.75□□□□□ -2.13
NCK1P16333 AC090517.3-201ENST00000625170 141 ntBASIC1.75□□□□□ -2.13
NCK1P16333 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
NCK1P16333 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
NCK1P16333 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NCK1P16333 SNORA62.1-201ENST00000364287 154 ntBASIC1.74□□□□□ -2.13
NCK1P16333 RNU6-550P-201ENST00000391057 101 ntBASIC1.74□□□□□ -2.13
NCK1P16333 RNA5SP425-201ENST00000410336 112 ntBASIC1.74□□□□□ -2.13
NCK1P16333 AL445646.1-201ENST00000431784 216 ntBASIC1.74□□□□□ -2.13
NCK1P16333 RPS15AP10-201ENST00000432472 382 ntBASIC1.74□□□□□ -2.13
NCK1P16333 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.74□□□□□ -2.13
NCK1P16333 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.74□□□□□ -2.13
NCK1P16333 RPL23AP6-201ENST00000446637 472 ntBASIC1.74□□□□□ -2.13
NCK1P16333 RPL39P29-201ENST00000447779 157 ntBASIC1.74□□□□□ -2.13
NCK1P16333 GAPDHP17-201ENST00000449858 1001 ntBASIC1.74□□□□□ -2.13
NCK1P16333 AL353752.1-201ENST00000454946 260 ntBASIC1.74□□□□□ -2.13
NCK1P16333 RNU7-182P-201ENST00000459009 62 ntBASIC1.74□□□□□ -2.13
NCK1P16333 RNA5SP269-201ENST00000459032 137 ntBASIC1.74□□□□□ -2.13
NCK1P16333 RNU6-333P-201ENST00000459117 107 ntBASIC1.74□□□□□ -2.13
NCK1P16333 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.74□□□□□ -2.13
NCK1P16333 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.74□□□□□ -2.13
NCK1P16333 MTND2P33-201ENST00000506452 1031 ntBASIC1.74□□□□□ -2.13
NCK1P16333 AC109479.2-201ENST00000517842 174 ntBASIC1.74□□□□□ -2.13
NCK1P16333 OR5AL2P-201ENST00000532185 920 ntBASIC1.74□□□□□ -2.13
NCK1P16333 MIR4760-201ENST00000585040 80 ntBASIC1.74□□□□□ -2.13
NCK1P16333 VN1R107P-201ENST00000601784 209 ntBASIC1.74□□□□□ -2.13
NCK1P16333 AC018889.1-201ENST00000605372 397 ntBASIC1.74□□□□□ -2.13
NCK1P16333 Z82243.1-201ENST00000609432 473 ntBASIC1.74□□□□□ -2.13
NCK1P16333 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
NCK1P16333 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.74□□□□□ -2.13
NCK1P16333 AL603755.1-201ENST00000619504 163 ntBASIC1.74□□□□□ -2.13
NCK1P16333 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NCK1P16333 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NCK1P16333 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
NCK1P16333 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
NCK1P16333 RNU4-21P-201ENST00000362802 126 ntBASIC1.73□□□□□ -2.13
NCK1P16333 Y_RNA.99-201ENST00000363138 105 ntBASIC1.73□□□□□ -2.13
NCK1P16333 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
NCK1P16333 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
NCK1P16333 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.73□□□□□ -2.13
NCK1P16333 AL356432.1-201ENST00000405809 419 ntBASIC1.73□□□□□ -2.13
NCK1P16333 MIR1262-201ENST00000408276 93 ntBASIC1.73□□□□□ -2.13
NCK1P16333 RNU4-46P-201ENST00000410818 138 ntBASIC1.73□□□□□ -2.13
NCK1P16333 UBE2V1P4-201ENST00000425374 344 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AL356320.1-201ENST00000429616 163 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.73□□□□□ -2.13
NCK1P16333 AC000111.3-201ENST00000433478 193 ntBASIC1.73□□□□□ -2.13
NCK1P16333 IFNA20P-201ENST00000436840 528 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AL353705.4-201ENST00000449661 238 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AC022364.2-201ENST00000457963 554 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.73□□□□□ -2.13
NCK1P16333 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.73□□□□□ -2.13
NCK1P16333 RPL9P6-201ENST00000492764 598 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.73□□□□□ -2.13
NCK1P16333 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.73□□□□□ -2.13
NCK1P16333 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.73□□□□□ -2.13
NCK1P16333 AC022254.1-201ENST00000567857 235 ntBASIC1.73□□□□□ -2.13
NCK1P16333 MIR548AB-201ENST00000584917 84 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AC078795.2-201ENST00000602835 1252 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AC245014.2-201ENST00000603689 287 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AC246785.4-201ENST00000605374 287 ntBASIC1.73□□□□□ -2.13
NCK1P16333 AC006566.1-201ENST00000608943 513 ntBASIC1.73□□□□□ -2.13
NCK1P16333 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.73□□□□□ -2.13
NCK1P16333 SEPT14P19-203ENST00000633205 211 ntBASIC1.73□□□□□ -2.13
NCK1P16333 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.72□□□□□ -2.13
NCK1P16333 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
NCK1P16333 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.72□□□□□ -2.13
NCK1P16333 RNU6-1285P-201ENST00000363480 105 ntBASIC1.72□□□□□ -2.13
NCK1P16333 RNU6-944P-201ENST00000364023 107 ntBASIC1.72□□□□□ -2.13
NCK1P16333 RNY4P34-201ENST00000364779 95 ntBASIC1.72□□□□□ -2.13
NCK1P16333 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
NCK1P16333 AL079342.1-201ENST00000401460 267 ntBASIC1.72□□□□□ -2.13
NCK1P16333 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.72□□□□□ -2.13
NCK1P16333 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.72□□□□□ -2.13
NCK1P16333 AL596276.1-201ENST00000434465 418 ntBASIC1.72□□□□□ -2.13
NCK1P16333 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.72□□□□□ -2.13
NCK1P16333 MTCYBP1-201ENST00000454315 1119 ntBASIC1.72□□□□□ -2.13
NCK1P16333 AC132942.1-201ENST00000486753 483 ntBASIC1.72□□□□□ -2.13
NCK1P16333 ANXA2P1-201ENST00000505539 926 ntBASIC1.72□□□□□ -2.13
NCK1P16333 RNU2-44P-201ENST00000516795 194 ntBASIC1.72□□□□□ -2.13
NCK1P16333 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.72□□□□□ -2.13
NCK1P16333 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.72□□□□□ -2.13
NCK1P16333 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.72□□□□□ -2.13
NCK1P16333 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.72□□□□□ -2.13
NCK1P16333 AL512310.1-201ENST00000548639 172 ntBASIC1.72□□□□□ -2.13
NCK1P16333 AC109446.2-201ENST00000567872 497 ntBASIC1.72□□□□□ -2.13
NCK1P16333 AC137800.2-201ENST00000574375 120 ntBASIC1.72□□□□□ -2.13
NCK1P16333 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms