Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.06□□□□□ -2.4
ACANP16112 SPINT5P-201ENST00000448174 155 ntBASIC0.06□□□□□ -2.4
ACANP16112 RPL31P53-201ENST00000457065 348 ntBASIC0.06□□□□□ -2.4
ACANP16112 BET1P1-201ENST00000482276 359 ntBASIC0.06□□□□□ -2.4
ACANP16112 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.06□□□□□ -2.4
ACANP16112 TRBVA-201ENST00000498804 316 ntBASIC0.06□□□□□ -2.4
ACANP16112 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.06□□□□□ -2.4
ACANP16112 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.06□□□□□ -2.4
ACANP16112 RNU4-54P-201ENST00000516428 129 ntBASIC0.06□□□□□ -2.4
ACANP16112 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.06□□□□□ -2.4
ACANP16112 AC104417.1-201ENST00000523974 751 ntBASIC0.06□□□□□ -2.4
ACANP16112 AC006199.1-201ENST00000548728 219 ntBASIC0.06□□□□□ -2.4
ACANP16112 AL391813.1-201ENST00000603098 260 ntBASIC0.06□□□□□ -2.4
ACANP16112 AC121334.2-201ENST00000605387 271 ntBASIC0.06□□□□□ -2.4
ACANP16112 AC098614.4-201ENST00000607601 462 ntBASIC0.06□□□□□ -2.4
ACANP16112 AC009269.6-201ENST00000621778 588 ntBASIC0.06□□□□□ -2.4
ACANP16112 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.06□□□□□ -2.4
ACANP16112 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.05□□□□□ -2.4
ACANP16112 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
ACANP16112 RNU6-349P-201ENST00000362402 107 ntBASIC0.05□□□□□ -2.4
ACANP16112 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
ACANP16112 SNORA25B-201ENST00000365507 128 ntBASIC0.05□□□□□ -2.4
ACANP16112 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
ACANP16112 SNORD99-201ENST00000408612 74 ntBASIC0.05□□□□□ -2.4
ACANP16112 UBE2V1P4-201ENST00000425374 344 ntBASIC0.05□□□□□ -2.4
ACANP16112 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.05□□□□□ -2.4
ACANP16112 RNFT1P2-201ENST00000443064 757 ntBASIC0.05□□□□□ -2.4
ACANP16112 RAC1P7-201ENST00000445367 377 ntBASIC0.05□□□□□ -2.4
ACANP16112 AC084024.2-201ENST00000503480 791 ntBASIC0.05□□□□□ -2.4
ACANP16112 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
ACANP16112 AC067904.2-201ENST00000517322 1283 ntBASIC0.05□□□□□ -2.4
ACANP16112 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.05□□□□□ -2.4
ACANP16112 HSPA8P13-201ENST00000523715 472 ntBASIC0.05□□□□□ -2.4
ACANP16112 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.05□□□□□ -2.4
ACANP16112 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.05□□□□□ -2.4
ACANP16112 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.05□□□□□ -2.4
ACANP16112 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.05□□□□□ -2.4
ACANP16112 AC136618.2-201ENST00000575091 400 ntBASIC0.05□□□□□ -2.4
ACANP16112 AP005229.2-201ENST00000609980 697 ntBASIC0.05□□□□□ -2.4
ACANP16112 AL158163.2-201ENST00000619110 700 ntBASIC0.05□□□□□ -2.4
ACANP16112 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
ACANP16112 AC010615.1-201ENST00000594254 1764 ntBASIC0.05□□□□□ -2.4
ACANP16112 LINC02555-201ENST00000563933 1951 ntBASIC0.05□□□□□ -2.4
ACANP16112 RNU6-348P-201ENST00000384386 107 ntBASIC0.05□□□□□ -2.4
ACANP16112 MIR587-201ENST00000384845 96 ntBASIC0.05□□□□□ -2.4
ACANP16112 RNA5SP219-201ENST00000390940 113 ntBASIC0.05□□□□□ -2.4
ACANP16112 RPL22P22-201ENST00000395439 379 ntBASIC0.05□□□□□ -2.4
ACANP16112 RNA5SP451-201ENST00000410588 110 ntBASIC0.05□□□□□ -2.4
ACANP16112 RNU6-1054P-201ENST00000411293 104 ntBASIC0.05□□□□□ -2.4
ACANP16112 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.05□□□□□ -2.4
ACANP16112 AC108740.1-201ENST00000498629 225 ntBASIC0.05□□□□□ -2.4
ACANP16112 AP003392.2-201ENST00000527269 208 ntBASIC0.05□□□□□ -2.4
ACANP16112 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.05□□□□□ -2.4
ACANP16112 AC004584.2-201ENST00000570407 410 ntBASIC0.05□□□□□ -2.4
ACANP16112 BNIP3P23-201ENST00000599655 511 ntBASIC0.05□□□□□ -2.4
ACANP16112 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.05□□□□□ -2.4
ACANP16112 AC009318.4-201ENST00000620496 486 ntBASIC0.05□□□□□ -2.4
ACANP16112 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.05□□□□□ -2.4
ACANP16112 RNU6-486P-201ENST00000363116 107 ntBASIC0.04□□□□□ -2.4
ACANP16112 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
ACANP16112 Y_RNA.421-201ENST00000384052 101 ntBASIC0.04□□□□□ -2.4
ACANP16112 RNA5SP100-201ENST00000410903 110 ntBASIC0.04□□□□□ -2.4
ACANP16112 RNA5SP59-201ENST00000410922 110 ntBASIC0.04□□□□□ -2.4
ACANP16112 HMGN2P22-201ENST00000427588 175 ntBASIC0.04□□□□□ -2.4
ACANP16112 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.04□□□□□ -2.4
ACANP16112 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.04□□□□□ -2.4
ACANP16112 FABP5P14-201ENST00000437273 393 ntBASIC0.04□□□□□ -2.4
ACANP16112 HSPE1P9-201ENST00000440046 311 ntBASIC0.04□□□□□ -2.4
ACANP16112 MTATP6P23-201ENST00000440153 476 ntBASIC0.04□□□□□ -2.4
ACANP16112 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.04□□□□□ -2.4
ACANP16112 MTCO2P25-201ENST00000447065 681 ntBASIC0.04□□□□□ -2.4
ACANP16112 GAPDHP17-201ENST00000449858 1001 ntBASIC0.04□□□□□ -2.4
ACANP16112 RPL18AP17-201ENST00000455326 198 ntBASIC0.04□□□□□ -2.4
ACANP16112 MEMO1P3-201ENST00000459811 302 ntBASIC0.04□□□□□ -2.4
ACANP16112 AC112771.1-201ENST00000463581 102 ntBASIC0.04□□□□□ -2.4
ACANP16112 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.04□□□□□ -2.4
ACANP16112 AC111000.5-201ENST00000506559 1178 ntBASIC0.04□□□□□ -2.4
ACANP16112 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.04□□□□□ -2.4
ACANP16112 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.04□□□□□ -2.4
ACANP16112 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.04□□□□□ -2.4
ACANP16112 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.04□□□□□ -2.4
ACANP16112 AL512310.8-201ENST00000550183 120 ntBASIC0.04□□□□□ -2.4
ACANP16112 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.04□□□□□ -2.4
ACANP16112 AL132822.1-201ENST00000617063 513 ntBASIC0.04□□□□□ -2.4
ACANP16112 AL662814.1-201ENST00000617364 121 ntBASIC0.04□□□□□ -2.4
ACANP16112 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.04□□□□□ -2.4
ACANP16112 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.04□□□□□ -2.4
ACANP16112 TAF9BP2-201ENST00000400856 499 ntBASIC0.04□□□□□ -2.4
ACANP16112 RNU2-43P-201ENST00000410306 190 ntBASIC0.04□□□□□ -2.4
ACANP16112 Y_RNA.630-201ENST00000411370 108 ntBASIC0.04□□□□□ -2.4
ACANP16112 BUD31P2-201ENST00000449374 300 ntBASIC0.04□□□□□ -2.4
ACANP16112 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.04□□□□□ -2.4
ACANP16112 RPL36AP48-201ENST00000485521 314 ntBASIC0.04□□□□□ -2.4
ACANP16112 LARP1BP2-201ENST00000486594 519 ntBASIC0.04□□□□□ -2.4
ACANP16112 AL049874.1-201ENST00000489560 388 ntBASIC0.04□□□□□ -2.4
ACANP16112 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.04□□□□□ -2.4
ACANP16112 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.04□□□□□ -2.4
ACANP16112 SNORA77B-201ENST00000578179 125 ntBASIC0.04□□□□□ -2.4
ACANP16112 AC068790.6-201ENST00000602558 258 ntBASIC0.04□□□□□ -2.4
ACANP16112 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms