Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-1210P-201ENST00000363775 107 ntBASIC1.41□□□□□ -2.18
CD28P10747 Y_RNA.367-201ENST00000365544 101 ntBASIC1.41□□□□□ -2.18
CD28P10747 RNU6-1032P-201ENST00000384100 107 ntBASIC1.41□□□□□ -2.18
CD28P10747 RNU6-74P-201ENST00000384235 107 ntBASIC1.41□□□□□ -2.18
CD28P10747 MIR676-201ENST00000390702 67 ntBASIC1.41□□□□□ -2.18
CD28P10747 SNORA17.3-201ENST00000391159 129 ntBASIC1.41□□□□□ -2.18
CD28P10747 RNA5SP450-201ENST00000411206 102 ntBASIC1.41□□□□□ -2.18
CD28P10747 OR9R1P-201ENST00000412200 877 ntBASIC1.41□□□□□ -2.18
CD28P10747 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.41□□□□□ -2.18
CD28P10747 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.41□□□□□ -2.18
CD28P10747 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.41□□□□□ -2.18
CD28P10747 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.41□□□□□ -2.18
CD28P10747 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.41□□□□□ -2.18
CD28P10747 GNAI2P1-201ENST00000541815 315 ntBASIC1.41□□□□□ -2.18
CD28P10747 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.41□□□□□ -2.18
CD28P10747 AC087883.1-201ENST00000551882 391 ntBASIC1.41□□□□□ -2.18
CD28P10747 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.41□□□□□ -2.18
CD28P10747 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.41□□□□□ -2.18
CD28P10747 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.41□□□□□ -2.18
CD28P10747 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.41□□□□□ -2.18
CD28P10747 MIR3915-201ENST00000578518 97 ntBASIC1.41□□□□□ -2.18
CD28P10747 MIR5692A1-201ENST00000580523 69 ntBASIC1.41□□□□□ -2.18
CD28P10747 AL031274.2-201ENST00000599419 203 ntBASIC1.41□□□□□ -2.18
CD28P10747 SNRPGP17-201ENST00000603780 214 ntBASIC1.41□□□□□ -2.18
CD28P10747 AL627230.6-201ENST00000611129 280 ntBASIC1.41□□□□□ -2.18
CD28P10747 AL359314.1-201ENST00000616913 261 ntBASIC1.41□□□□□ -2.18
CD28P10747 AL132822.1-201ENST00000617063 513 ntBASIC1.41□□□□□ -2.18
CD28P10747 AF246928.1-201ENST00000623768 87 ntBASIC1.41□□□□□ -2.18
CD28P10747 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.4□□□□□ -2.18
CD28P10747 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CD28P10747 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CD28P10747 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CD28P10747 RNU4-91P-201ENST00000364778 135 ntBASIC1.4□□□□□ -2.19
CD28P10747 RNU6-108P-201ENST00000365558 107 ntBASIC1.4□□□□□ -2.19
CD28P10747 RNU6-1274P-201ENST00000384557 107 ntBASIC1.4□□□□□ -2.19
CD28P10747 MIR518A2-201ENST00000384966 87 ntBASIC1.4□□□□□ -2.19
CD28P10747 MIR1294-201ENST00000408503 142 ntBASIC1.4□□□□□ -2.19
CD28P10747 Y_RNA.595-201ENST00000410403 105 ntBASIC1.4□□□□□ -2.19
CD28P10747 BTF3L4P1-201ENST00000413813 468 ntBASIC1.4□□□□□ -2.19
CD28P10747 CYCSP33-201ENST00000414485 327 ntBASIC1.4□□□□□ -2.19
CD28P10747 OR6C66P-201ENST00000414917 930 ntBASIC1.4□□□□□ -2.19
CD28P10747 RPL21P90-201ENST00000415692 466 ntBASIC1.4□□□□□ -2.19
CD28P10747 AC138623.1-201ENST00000418060 216 ntBASIC1.4□□□□□ -2.19
CD28P10747 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.4□□□□□ -2.19
CD28P10747 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.4□□□□□ -2.19
CD28P10747 AL365400.1-201ENST00000431854 640 ntBASIC1.4□□□□□ -2.19
CD28P10747 AC000111.3-201ENST00000433478 193 ntBASIC1.4□□□□□ -2.19
CD28P10747 AC007969.2-201ENST00000441891 191 ntBASIC1.4□□□□□ -2.19
CD28P10747 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.4□□□□□ -2.19
CD28P10747 AC079781.2-201ENST00000446424 169 ntBASIC1.4□□□□□ -2.19
CD28P10747 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.4□□□□□ -2.19
CD28P10747 GAPDHP17-201ENST00000449858 1001 ntBASIC1.4□□□□□ -2.19
CD28P10747 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.4□□□□□ -2.19
CD28P10747 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.4□□□□□ -2.19
CD28P10747 PMCHL2-203ENST00000457791 237 ntBASIC1.4□□□□□ -2.19
CD28P10747 SNORD42A-201ENST00000459584 64 ntBASIC1.4□□□□□ -2.19
CD28P10747 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CD28P10747 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.4□□□□□ -2.19
CD28P10747 AC117532.1-201ENST00000514638 323 ntBASIC1.4□□□□□ -2.19
CD28P10747 RNU6-410P-201ENST00000517006 107 ntBASIC1.4□□□□□ -2.19
CD28P10747 CYCSP27-201ENST00000527643 293 ntBASIC1.4□□□□□ -2.19
CD28P10747 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.4□□□□□ -2.19
CD28P10747 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.4□□□□□ -2.19
CD28P10747 MIR4287-201ENST00000579398 78 ntBASIC1.4□□□□□ -2.19
CD28P10747 AC023043.2-201ENST00000589678 1026 ntBASIC1.4□□□□□ -2.19
CD28P10747 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.4□□□□□ -2.19
CD28P10747 CLIC4P2-201ENST00000601934 717 ntBASIC1.4□□□□□ -2.19
CD28P10747 AL136363.2-201ENST00000604173 851 ntBASIC1.4□□□□□ -2.19
CD28P10747 AC016727.1-205ENST00000605437 569 ntBASIC1.4□□□□□ -2.19
CD28P10747 AL133173.2-201ENST00000614270 90 ntBASIC1.4□□□□□ -2.19
CD28P10747 AP001506.1-201ENST00000615444 211 ntBASIC1.4□□□□□ -2.19
CD28P10747 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.4□□□□□ -2.19
CD28P10747 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.4□□□□□ -2.19
CD28P10747 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.4□□□□□ -2.19
CD28P10747 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CD28P10747 AC131280.1-202ENST00000624067 4211 ntBASIC1.39□□□□□ -2.19
CD28P10747 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CD28P10747 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CD28P10747 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CD28P10747 RNU6-78P-201ENST00000362897 107 ntBASIC1.39□□□□□ -2.19
CD28P10747 RNU6-457P-201ENST00000363999 107 ntBASIC1.39□□□□□ -2.19
CD28P10747 SNORA16.1-201ENST00000364597 132 ntBASIC1.39□□□□□ -2.19
CD28P10747 U3.13-201ENST00000364804 214 ntBASIC1.39□□□□□ -2.19
CD28P10747 RNU6-611P-201ENST00000384276 104 ntBASIC1.39□□□□□ -2.19
CD28P10747 MIR454-201ENST00000390180 115 ntBASIC1.39□□□□□ -2.19
CD28P10747 AL512604.1-201ENST00000404812 257 ntBASIC1.39□□□□□ -2.19
CD28P10747 SUMO2P12-201ENST00000405924 140 ntBASIC1.39□□□□□ -2.19
CD28P10747 RNU6-248P-201ENST00000410720 107 ntBASIC1.39□□□□□ -2.19
CD28P10747 AL030996.1-201ENST00000411430 235 ntBASIC1.39□□□□□ -2.19
CD28P10747 AC096920.1-201ENST00000423991 241 ntBASIC1.39□□□□□ -2.19
CD28P10747 GPR143P-201ENST00000434155 205 ntBASIC1.39□□□□□ -2.19
CD28P10747 MTND2P29-201ENST00000438595 412 ntBASIC1.39□□□□□ -2.19
CD28P10747 AL445567.1-201ENST00000439121 144 ntBASIC1.39□□□□□ -2.19
CD28P10747 AL022238.1-201ENST00000442557 355 ntBASIC1.39□□□□□ -2.19
CD28P10747 AL133217.1-201ENST00000450980 425 ntBASIC1.39□□□□□ -2.19
CD28P10747 AL137159.1-201ENST00000452808 512 ntBASIC1.39□□□□□ -2.19
CD28P10747 ART2BP-201ENST00000453501 499 ntBASIC1.39□□□□□ -2.19
CD28P10747 snoU109.1-201ENST00000459339 135 ntBASIC1.39□□□□□ -2.19
CD28P10747 HMGB1P35-201ENST00000503360 598 ntBASIC1.39□□□□□ -2.19
CD28P10747 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms