Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNU6-1179P-201ENST00000384667 107 ntBASIC3□□□□□ -1.93
HOXC6P09630 RNU6-95P-201ENST00000384697 107 ntBASIC3□□□□□ -1.93
HOXC6P09630 SNORD73A-201ENST00000386062 65 ntBASIC3□□□□□ -1.93
HOXC6P09630 SAR1AP2-201ENST00000392696 594 ntBASIC3□□□□□ -1.93
HOXC6P09630 Y_RNA.646-201ENST00000410980 101 ntBASIC3□□□□□ -1.93
HOXC6P09630 CYCSP33-201ENST00000414485 327 ntBASIC3□□□□□ -1.93
HOXC6P09630 AC007919.1-201ENST00000429380 217 ntBASIC3□□□□□ -1.93
HOXC6P09630 Y_RNA.631-201ENST00000459607 101 ntBASIC3□□□□□ -1.93
HOXC6P09630 RPL37P6-201ENST00000460682 294 ntBASIC3□□□□□ -1.93
HOXC6P09630 AC087588.1-201ENST00000462203 316 ntBASIC3□□□□□ -1.93
HOXC6P09630 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3□□□□□ -1.93
HOXC6P09630 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3□□□□□ -1.93
HOXC6P09630 RNU1-61P-201ENST00000516107 151 ntBASIC3□□□□□ -1.93
HOXC6P09630 SNORA70.16-201ENST00000516390 95 ntBASIC3□□□□□ -1.93
HOXC6P09630 MIR5692A1-201ENST00000580523 69 ntBASIC3□□□□□ -1.93
HOXC6P09630 MIR5690-201ENST00000583739 73 ntBASIC3□□□□□ -1.93
HOXC6P09630 MIR548AC-201ENST00000585049 88 ntBASIC3□□□□□ -1.93
HOXC6P09630 NUTF2P8-201ENST00000604593 363 ntBASIC3□□□□□ -1.93
HOXC6P09630 AC106900.2-201ENST00000604994 317 ntBASIC3□□□□□ -1.93
HOXC6P09630 AC090132.2-201ENST00000615881 347 ntBASIC3□□□□□ -1.93
HOXC6P09630 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3□□□□□ -1.93
HOXC6P09630 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3□□□□□ -1.93
HOXC6P09630 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HOXC6P09630 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC6P09630 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HOXC6P09630 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC6P09630 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC6P09630 OR56A5-201ENST00000340110 738 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 RNU1-100P-201ENST00000365255 165 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 Y_RNA.445-201ENST00000384168 102 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 RNU6-306P-201ENST00000384617 107 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 MIR606-201ENST00000384851 96 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HOXC6P09630 RN7SKP192-201ENST00000411291 327 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC6P09630 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.99□□□□□ -1.93
HOXC6P09630 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC6P09630 RPL7P10-201ENST00000417407 739 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 RPL27AP8-201ENST00000424277 446 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 HMGB1P9-201ENST00000429856 646 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 MTND4P19-201ENST00000446659 478 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 SSXP4-201ENST00000451349 245 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 Y_RNA.653-201ENST00000459091 95 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 MIR2053-201ENST00000459295 91 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 AL163540.1-201ENST00000485382 386 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC6P09630 MTCYBP40-201ENST00000509390 1135 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 CYCSP27-201ENST00000527643 293 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 AC026371.1-201ENST00000551867 419 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 TRAV37-201ENST00000553906 342 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC6P09630 AL133393.1-201ENST00000603277 287 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC6P09630 RNU6-85P-201ENST00000605989 107 ntBASIC2.99□□□□□ -1.93
HOXC6P09630 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
HOXC6P09630 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC6P09630 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HOXC6P09630 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC6P09630 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HOXC6P09630 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HOXC6P09630 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC6P09630 RPL9P7-201ENST00000330965 580 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 SNORD3E-201ENST00000362899 217 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 Y_RNA.197-201ENST00000364004 102 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 Y_RNA.404-201ENST00000383978 102 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 MIR27B-201ENST00000385129 97 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
HOXC6P09630 RNU2-3P-201ENST00000410144 191 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 Z85995.1-201ENST00000415547 335 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 YPEL5P1-201ENST00000419731 367 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 SNAP23P1-201ENST00000433229 246 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC6P09630 snoU13.15-201ENST00000459407 104 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 snoU13.26-201ENST00000459452 105 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 RPL7P42-201ENST00000481005 679 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC6P09630 AL359273.1-201ENST00000510918 627 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 RNU1-86P-201ENST00000516108 154 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 Y_RNA.670-201ENST00000516255 105 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 SCARNA15.2-201ENST00000516409 127 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 RNU1-107P-201ENST00000516617 154 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 RNU6-143P-201ENST00000516942 93 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 Y_RNA.711-201ENST00000516993 102 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.98□□□□□ -1.93
HOXC6P09630 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC6P09630 AC104576.1-201ENST00000524225 88 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC6P09630 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC6P09630 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC6P09630 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC6P09630 AC019193.3-201ENST00000609144 554 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 AL110115.1-201ENST00000614396 364 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 AC010378.1-201ENST00000619270 362 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 uc_338.22-201ENST00000622722 187 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC6P09630 AL669831.3-213ENST00000636676 183 ntBASIC2.98□□□□□ -1.93
HOXC6P09630 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HOXC6P09630 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC6P09630 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HOXC6P09630 SDAD1P2-201ENST00000441308 2028 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms