Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MTND5P9-201ENST00000503854 1755 ntBASIC1.26□□□□□ -2.21
TPM1P09493 SNORD33-201ENST00000362761 85 ntBASIC1.26□□□□□ -2.21
TPM1P09493 RNU6-433P-201ENST00000363216 104 ntBASIC1.26□□□□□ -2.21
TPM1P09493 MIR1289-2-201ENST00000408360 111 ntBASIC1.26□□□□□ -2.21
TPM1P09493 AC092648.1-201ENST00000425870 423 ntBASIC1.26□□□□□ -2.21
TPM1P09493 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.26□□□□□ -2.21
TPM1P09493 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
TPM1P09493 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.26□□□□□ -2.21
TPM1P09493 AC108078.1-201ENST00000508073 725 ntBASIC1.26□□□□□ -2.21
TPM1P09493 RNA5SP490-201ENST00000517141 136 ntBASIC1.26□□□□□ -2.21
TPM1P09493 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.26□□□□□ -2.21
TPM1P09493 AC091163.3-201ENST00000518269 1144 ntBASIC1.26□□□□□ -2.21
TPM1P09493 MIR4303-201ENST00000581299 66 ntBASIC1.26□□□□□ -2.21
TPM1P09493 AC023043.2-201ENST00000589678 1026 ntBASIC1.26□□□□□ -2.21
TPM1P09493 AL391001.1-201ENST00000602747 715 ntBASIC1.26□□□□□ -2.21
TPM1P09493 AC025811.1-201ENST00000604312 472 ntBASIC1.26□□□□□ -2.21
TPM1P09493 AL359547.2-201ENST00000615810 418 ntBASIC1.26□□□□□ -2.21
TPM1P09493 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
TPM1P09493 Y_RNA.46-201ENST00000362695 102 ntBASIC1.25□□□□□ -2.21
TPM1P09493 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TPM1P09493 SNORA22-201ENST00000383907 134 ntBASIC1.25□□□□□ -2.21
TPM1P09493 SNORA22C-201ENST00000384614 134 ntBASIC1.25□□□□□ -2.21
TPM1P09493 RNU6-360P-201ENST00000390944 104 ntBASIC1.25□□□□□ -2.21
TPM1P09493 RPS3AP36-201ENST00000398190 775 ntBASIC1.25□□□□□ -2.21
TPM1P09493 RNU4-22P-201ENST00000411058 166 ntBASIC1.25□□□□□ -2.21
TPM1P09493 RPL21P111-201ENST00000418453 477 ntBASIC1.25□□□□□ -2.21
TPM1P09493 MRPL35P3-201ENST00000421557 364 ntBASIC1.25□□□□□ -2.21
TPM1P09493 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.25□□□□□ -2.21
TPM1P09493 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.25□□□□□ -2.21
TPM1P09493 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TPM1P09493 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.25□□□□□ -2.21
TPM1P09493 KATNBL1P3-201ENST00000443475 909 ntBASIC1.25□□□□□ -2.21
TPM1P09493 GDI2P2-201ENST00000445131 608 ntBASIC1.25□□□□□ -2.21
TPM1P09493 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.25□□□□□ -2.21
TPM1P09493 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.25□□□□□ -2.21
TPM1P09493 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
TPM1P09493 AL512598.1-201ENST00000610158 273 ntBASIC1.25□□□□□ -2.21
TPM1P09493 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.25□□□□□ -2.21
TPM1P09493 RPL17P50-201ENST00000396131 546 ntBASIC1.24□□□□□ -2.21
TPM1P09493 PIGPP2-201ENST00000411569 458 ntBASIC1.24□□□□□ -2.21
TPM1P09493 MTATP6P20-201ENST00000414147 562 ntBASIC1.24□□□□□ -2.21
TPM1P09493 AC006366.1-201ENST00000422002 759 ntBASIC1.24□□□□□ -2.21
TPM1P09493 C8orf59P1-201ENST00000429930 303 ntBASIC1.24□□□□□ -2.21
TPM1P09493 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.24□□□□□ -2.21
TPM1P09493 FTH1P12-201ENST00000432137 551 ntBASIC1.24□□□□□ -2.21
TPM1P09493 EEF1A1P39-201ENST00000440791 250 ntBASIC1.24□□□□□ -2.21
TPM1P09493 AL022238.1-201ENST00000442557 355 ntBASIC1.24□□□□□ -2.21
TPM1P09493 RPL39P29-201ENST00000447779 157 ntBASIC1.24□□□□□ -2.21
TPM1P09493 HMGN2P18-201ENST00000450680 270 ntBASIC1.24□□□□□ -2.21
TPM1P09493 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.24□□□□□ -2.21
TPM1P09493 RPL9P9-202ENST00000466501 579 ntBASIC1.24□□□□□ -2.21
TPM1P09493 OR2A41P-201ENST00000473586 105 ntBASIC1.24□□□□□ -2.21
TPM1P09493 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.24□□□□□ -2.21
TPM1P09493 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.24□□□□□ -2.21
TPM1P09493 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.24□□□□□ -2.21
TPM1P09493 SNORA3.4-201ENST00000515969 96 ntBASIC1.24□□□□□ -2.21
TPM1P09493 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.24□□□□□ -2.21
TPM1P09493 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.24□□□□□ -2.21
TPM1P09493 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.24□□□□□ -2.21
TPM1P09493 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.24□□□□□ -2.21
TPM1P09493 MIR548AC-201ENST00000585049 88 ntBASIC1.24□□□□□ -2.21
TPM1P09493 AL592221.1-201ENST00000605266 382 ntBASIC1.24□□□□□ -2.21
TPM1P09493 AL355802.3-201ENST00000607571 545 ntBASIC1.24□□□□□ -2.21
TPM1P09493 AC100821.1-201ENST00000523153 2479 ntBASIC1.23□□□□□ -2.21
TPM1P09493 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TPM1P09493 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.23□□□□□ -2.21
TPM1P09493 OR6C66P-201ENST00000414917 930 ntBASIC1.23□□□□□ -2.21
TPM1P09493 AL358794.1-201ENST00000445689 381 ntBASIC1.23□□□□□ -2.21
TPM1P09493 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.23□□□□□ -2.21
TPM1P09493 AL122001.1-201ENST00000457027 370 ntBASIC1.23□□□□□ -2.21
TPM1P09493 RN7SKP210-201ENST00000459176 261 ntBASIC1.23□□□□□ -2.21
TPM1P09493 RPL36AP21-201ENST00000490372 323 ntBASIC1.23□□□□□ -2.21
TPM1P09493 AC097473.1-201ENST00000508142 408 ntBASIC1.23□□□□□ -2.21
TPM1P09493 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.23□□□□□ -2.21
TPM1P09493 AL158827.2-201ENST00000602494 330 ntBASIC1.23□□□□□ -2.21
TPM1P09493 AC103810.9-201ENST00000606688 112 ntBASIC1.23□□□□□ -2.21
TPM1P09493 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TPM1P09493 AL691447.3-201ENST00000635020 330 ntBASIC1.23□□□□□ -2.21
TPM1P09493 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TPM1P09493 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.22□□□□□ -2.21
TPM1P09493 SNORD32B-201ENST00000364460 84 ntBASIC1.22□□□□□ -2.21
TPM1P09493 Y_RNA.255-201ENST00000364581 97 ntBASIC1.22□□□□□ -2.21
TPM1P09493 RNU6-384P-201ENST00000364900 104 ntBASIC1.22□□□□□ -2.21
TPM1P09493 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.22□□□□□ -2.21
TPM1P09493 RPL37P10-201ENST00000412884 288 ntBASIC1.22□□□□□ -2.21
TPM1P09493 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.22□□□□□ -2.21
TPM1P09493 RPS3AP37-201ENST00000419176 745 ntBASIC1.22□□□□□ -2.21
TPM1P09493 MTND4P20-201ENST00000424125 869 ntBASIC1.22□□□□□ -2.21
TPM1P09493 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.22□□□□□ -2.21
TPM1P09493 CST2P1-201ENST00000425770 87 ntBASIC1.22□□□□□ -2.21
TPM1P09493 HSPE1P9-201ENST00000440046 311 ntBASIC1.22□□□□□ -2.21
TPM1P09493 FTH1P25-201ENST00000447665 469 ntBASIC1.22□□□□□ -2.21
TPM1P09493 RPS27AP8-201ENST00000452665 445 ntBASIC1.22□□□□□ -2.21
TPM1P09493 snoU13.26-201ENST00000459452 105 ntBASIC1.22□□□□□ -2.21
TPM1P09493 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
TPM1P09493 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.22□□□□□ -2.21
TPM1P09493 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.22□□□□□ -2.21
TPM1P09493 AC123904.2-201ENST00000548059 300 ntBASIC1.22□□□□□ -2.21
TPM1P09493 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.22□□□□□ -2.21
TPM1P09493 AC090115.3-201ENST00000553218 849 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms