Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AL512605.2-201ENST00000592972 256 ntBASIC0.3□□□□□ -2.36
HMGN1P05114 DPPA3P3-201ENST00000603842 430 ntBASIC0.3□□□□□ -2.36
HMGN1P05114 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.3□□□□□ -2.36
HMGN1P05114 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.29□□□□□ -2.36
HMGN1P05114 BX119904.4-201ENST00000424402 301 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 AC098934.3-201ENST00000430450 190 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN1P05114 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN1P05114 MTND2P6-201ENST00000455337 1030 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 AC104629.1-201ENST00000494226 508 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN1P05114 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 RN7SKP258-201ENST00000517151 304 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 AC012414.2-201ENST00000559474 187 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.29□□□□□ -2.36
HMGN1P05114 AL353765.1-201ENST00000605514 183 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 AP000654.2-201ENST00000605633 586 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN1P05114 MIR5087-201ENST00000635826 76 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 MIR1322-201ENST00000638013 71 ntBASIC0.29□□□□□ -2.36
HMGN1P05114 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
HMGN1P05114 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 AC099677.2-201ENST00000436385 175 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 AL603825.1-201ENST00000438481 80 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.28□□□□□ -2.36
HMGN1P05114 MTATP6P30-201ENST00000443540 664 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGN1P05114 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGN1P05114 AC079140.3-201ENST00000511111 550 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 RNU6-572P-201ENST00000516724 80 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 AC104417.1-201ENST00000523974 751 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 AL590705.4-201ENST00000532209 134 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 AC023050.2-201ENST00000544968 387 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGN1P05114 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGN1P05114 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.28□□□□□ -2.36
HMGN1P05114 BNIP3P30-201ENST00000601184 574 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 RNU6-87P-201ENST00000607561 108 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 AP001596.2-201ENST00000608410 312 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 MIR1264-201ENST00000616374 69 ntBASIC0.28□□□□□ -2.36
HMGN1P05114 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
HMGN1P05114 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
HMGN1P05114 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
HMGN1P05114 SNORD51.1-201ENST00000365405 77 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 SNORD114-22-201ENST00000365423 72 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 RNU6-1235P-201ENST00000384559 107 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 Y_RNA.597-201ENST00000410463 100 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGN1P05114 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGN1P05114 RNU6-498P-201ENST00000459468 107 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 RPS29P1-201ENST00000465274 159 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 ATP5EP1-201ENST00000510257 156 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 RNU6-237P-201ENST00000515985 71 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 SNORA31.2-201ENST00000516019 134 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 RNA5SP255-201ENST00000516370 107 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 RNU6-165P-201ENST00000517170 99 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGN1P05114 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGN1P05114 AC022022.2-201ENST00000602989 360 ntBASIC0.27□□□□□ -2.37
HMGN1P05114 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.27□□□□□ -2.37
HMGN1P05114 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.27□□□□□ -2.37
HMGN1P05114 RNA5SP259-201ENST00000365541 109 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 RNU6-114P-201ENST00000384704 105 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 MIR1276-201ENST00000408707 83 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 UBE2V1P10-201ENST00000414685 269 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.26□□□□□ -2.37
HMGN1P05114 COX7BP2-201ENST00000437976 242 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 AL008629.1-201ENST00000438615 184 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 GAPDHP17-201ENST00000449858 1001 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.26□□□□□ -2.37
HMGN1P05114 snoU13.27-201ENST00000459278 104 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 RN7SKP49-201ENST00000516675 260 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.26□□□□□ -2.37
HMGN1P05114 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.26□□□□□ -2.37
HMGN1P05114 AC092451.2-201ENST00000538746 658 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.26□□□□□ -2.37
HMGN1P05114 AC099654.9-201ENST00000637055 678 ntBASIC0.26□□□□□ -2.37
HMGN1P05114 ELL2P3-201ENST00000457883 1602 ntBASIC0.25□□□□□ -2.37
HMGN1P05114 OR4G2P-201ENST00000328113 903 ntBASIC0.25□□□□□ -2.37
HMGN1P05114 RNU6-487P-201ENST00000365430 104 ntBASIC0.25□□□□□ -2.37
HMGN1P05114 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
HMGN1P05114 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
HMGN1P05114 AC092423.1-201ENST00000430165 186 ntBASIC0.25□□□□□ -2.37
HMGN1P05114 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.25□□□□□ -2.37
HMGN1P05114 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.25□□□□□ -2.37
HMGN1P05114 AC010631.1-201ENST00000474150 156 ntBASIC0.25□□□□□ -2.37
HMGN1P05114 AC098869.1-201ENST00000481627 292 ntBASIC0.25□□□□□ -2.37
HMGN1P05114 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.25□□□□□ -2.37
HMGN1P05114 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.25□□□□□ -2.37
HMGN1P05114 AL359757.2-201ENST00000624309 274 ntBASIC0.25□□□□□ -2.37
HMGN1P05114 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.25□□□□□ -2.37
HMGN1P05114 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.24□□□□□ -2.37
HMGN1P05114 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
HMGN1P05114 Y_RNA.25-201ENST00000362528 102 ntBASIC0.24□□□□□ -2.37
HMGN1P05114 U3.8-201ENST00000363675 217 ntBASIC0.24□□□□□ -2.37
HMGN1P05114 RNU6-707P-201ENST00000364647 95 ntBASIC0.24□□□□□ -2.37
HMGN1P05114 RNU6-843P-201ENST00000384454 104 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms