Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
APOEP02649 RPS15AP10-201ENST00000432472 382 ntBASIC1.07□□□□□ -2.24
APOEP02649 TIMM9P1-201ENST00000436122 256 ntBASIC1.07□□□□□ -2.24
APOEP02649 RPL30P12-201ENST00000474666 353 ntBASIC1.07□□□□□ -2.24
APOEP02649 AC079395.1-201ENST00000510981 262 ntBASIC1.07□□□□□ -2.24
APOEP02649 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.07□□□□□ -2.24
APOEP02649 LRRC6P1-201ENST00000532188 885 ntBASIC1.07□□□□□ -2.24
APOEP02649 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.07□□□□□ -2.24
APOEP02649 AC012414.6-201ENST00000568241 401 ntBASIC1.07□□□□□ -2.24
APOEP02649 AC137800.2-201ENST00000574375 120 ntBASIC1.07□□□□□ -2.24
APOEP02649 AL078604.3-201ENST00000615580 211 ntBASIC1.07□□□□□ -2.24
APOEP02649 AL133216.2-202ENST00000634512 349 ntBASIC1.07□□□□□ -2.24
APOEP02649 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.07□□□□□ -2.24
APOEP02649 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
APOEP02649 ICE2P2-201ENST00000483823 2787 ntBASIC1.07□□□□□ -2.24
APOEP02649 RNU6-395P-201ENST00000365662 106 ntBASIC1.06□□□□□ -2.24
APOEP02649 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
APOEP02649 RNU6-296P-201ENST00000384608 107 ntBASIC1.06□□□□□ -2.24
APOEP02649 Y_RNA.623-201ENST00000411128 95 ntBASIC1.06□□□□□ -2.24
APOEP02649 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.06□□□□□ -2.24
APOEP02649 AL022238.1-201ENST00000442557 355 ntBASIC1.06□□□□□ -2.24
APOEP02649 RPL39P29-201ENST00000447779 157 ntBASIC1.06□□□□□ -2.24
APOEP02649 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.06□□□□□ -2.24
APOEP02649 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.06□□□□□ -2.24
APOEP02649 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.06□□□□□ -2.24
APOEP02649 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
APOEP02649 Y_RNA.676-201ENST00000516393 96 ntBASIC1.06□□□□□ -2.24
APOEP02649 RNA5SP102-201ENST00000516865 106 ntBASIC1.06□□□□□ -2.24
APOEP02649 RNU6-677P-201ENST00000516914 101 ntBASIC1.06□□□□□ -2.24
APOEP02649 AC019176.1-201ENST00000518519 225 ntBASIC1.06□□□□□ -2.24
APOEP02649 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
APOEP02649 AC090115.3-201ENST00000553218 849 ntBASIC1.06□□□□□ -2.24
APOEP02649 MIR5094-201ENST00000578766 85 ntBASIC1.06□□□□□ -2.24
APOEP02649 AL596327.1-201ENST00000603629 213 ntBASIC1.06□□□□□ -2.24
APOEP02649 MIR8070-201ENST00000616510 88 ntBASIC1.06□□□□□ -2.24
APOEP02649 MTND5P9-201ENST00000503854 1755 ntBASIC1.06□□□□□ -2.24
APOEP02649 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
APOEP02649 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
APOEP02649 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
APOEP02649 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.05□□□□□ -2.24
APOEP02649 AC027119.1-201ENST00000440877 241 ntBASIC1.05□□□□□ -2.24
APOEP02649 DYNLT3P2-201ENST00000442517 295 ntBASIC1.05□□□□□ -2.24
APOEP02649 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.05□□□□□ -2.24
APOEP02649 HMGN1P13-201ENST00000505795 138 ntBASIC1.05□□□□□ -2.24
APOEP02649 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.05□□□□□ -2.24
APOEP02649 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.05□□□□□ -2.24
APOEP02649 AC005786.1-201ENST00000588553 154 ntBASIC1.05□□□□□ -2.24
APOEP02649 VN1R82P-201ENST00000601481 356 ntBASIC1.05□□□□□ -2.24
APOEP02649 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.05□□□□□ -2.24
APOEP02649 AC126544.2-201ENST00000625174 749 ntBASIC1.05□□□□□ -2.24
APOEP02649 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.05□□□□□ -2.24
APOEP02649 AC095038.3-201ENST00000634439 195 ntBASIC1.05□□□□□ -2.24
APOEP02649 AC092104.1-201ENST00000497346 1441 ntBASIC1.05□□□□□ -2.24
APOEP02649 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
APOEP02649 Y_RNA.472-201ENST00000384322 102 ntBASIC1.04□□□□□ -2.24
APOEP02649 CBX3P6-201ENST00000430257 527 ntBASIC1.04□□□□□ -2.24
APOEP02649 LARP1BP3-201ENST00000437229 869 ntBASIC1.04□□□□□ -2.24
APOEP02649 KATNBL1P3-201ENST00000443475 909 ntBASIC1.04□□□□□ -2.24
APOEP02649 RPL30P7-201ENST00000479312 323 ntBASIC1.04□□□□□ -2.24
APOEP02649 RPL26P26-201ENST00000480251 434 ntBASIC1.04□□□□□ -2.24
APOEP02649 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.04□□□□□ -2.24
APOEP02649 AC119751.4-201ENST00000507498 357 ntBASIC1.04□□□□□ -2.24
APOEP02649 AC108078.1-201ENST00000508073 725 ntBASIC1.04□□□□□ -2.24
APOEP02649 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.04□□□□□ -2.24
APOEP02649 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
APOEP02649 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.04□□□□□ -2.24
APOEP02649 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.04□□□□□ -2.24
APOEP02649 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.04□□□□□ -2.24
APOEP02649 AC100821.1-201ENST00000523153 2479 ntBASIC1.04□□□□□ -2.24
APOEP02649 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
APOEP02649 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
APOEP02649 RNU6-462P-201ENST00000362659 105 ntBASIC1.03□□□□□ -2.24
APOEP02649 RNU6-1080P-201ENST00000383982 107 ntBASIC1.03□□□□□ -2.24
APOEP02649 RNA5SP390-201ENST00000410191 113 ntBASIC1.03□□□□□ -2.24
APOEP02649 RPL21P111-201ENST00000418453 477 ntBASIC1.03□□□□□ -2.24
APOEP02649 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.03□□□□□ -2.24
APOEP02649 UBE2V1P8-201ENST00000437166 265 ntBASIC1.03□□□□□ -2.24
APOEP02649 JTBP1-201ENST00000441314 247 ntBASIC1.03□□□□□ -2.24
APOEP02649 RPS23P4-201ENST00000487908 423 ntBASIC1.03□□□□□ -2.24
APOEP02649 AC079140.2-201ENST00000506193 142 ntBASIC1.03□□□□□ -2.24
APOEP02649 AF131216.2-201ENST00000512316 564 ntBASIC1.03□□□□□ -2.24
APOEP02649 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.03□□□□□ -2.24
APOEP02649 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
APOEP02649 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.03□□□□□ -2.24
APOEP02649 AC022022.2-201ENST00000602989 360 ntBASIC1.03□□□□□ -2.24
APOEP02649 AC024940.5-201ENST00000622889 474 ntBASIC1.03□□□□□ -2.24
APOEP02649 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.03□□□□□ -2.24
APOEP02649 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
APOEP02649 SNORD114-27-201ENST00000363766 70 ntBASIC1.02□□□□□ -2.25
APOEP02649 MIR10A-201ENST00000385043 110 ntBASIC1.02□□□□□ -2.25
APOEP02649 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.02□□□□□ -2.25
APOEP02649 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.02□□□□□ -2.25
APOEP02649 ELOCP17-201ENST00000414751 326 ntBASIC1.02□□□□□ -2.25
APOEP02649 ELOCP9-201ENST00000418624 239 ntBASIC1.02□□□□□ -2.25
APOEP02649 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.02□□□□□ -2.25
APOEP02649 MTCYBP5-201ENST00000423752 1135 ntBASIC1.02□□□□□ -2.25
APOEP02649 AC109445.1-201ENST00000512356 383 ntBASIC1.02□□□□□ -2.25
APOEP02649 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.02□□□□□ -2.25
APOEP02649 MIR449C-201ENST00000516047 92 ntBASIC1.02□□□□□ -2.25
APOEP02649 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms