Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNU6-2-201ENST00000384627 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-29P-201ENST00000384637 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-9-201ENST00000384776 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-33P-201ENST00000384793 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 UBA52P6-201ENST00000399822 382 ntBASIC2.53□□□□□ -2
CLPTM1O96005 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.53□□□□□ -2
CLPTM1O96005 AC096664.2-201ENST00000411843 406 ntBASIC2.53□□□□□ -2
CLPTM1O96005 EEF1A1P41-201ENST00000414667 207 ntBASIC2.53□□□□□ -2
CLPTM1O96005 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.53□□□□□ -2
CLPTM1O96005 AL590632.1-201ENST00000424289 371 ntBASIC2.53□□□□□ -2
CLPTM1O96005 MTND3P23-201ENST00000431980 347 ntBASIC2.53□□□□□ -2
CLPTM1O96005 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.53□□□□□ -2
CLPTM1O96005 HMGB1P18-201ENST00000438801 619 ntBASIC2.53□□□□□ -2
CLPTM1O96005 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.53□□□□□ -2
CLPTM1O96005 NDUFB1P2-201ENST00000449477 176 ntBASIC2.53□□□□□ -2
CLPTM1O96005 MTATP6P7-201ENST00000453315 681 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU7-138P-201ENST00000459479 64 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RPS29P26-201ENST00000477483 171 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RPL31P41-201ENST00000477967 372 ntBASIC2.53□□□□□ -2
CLPTM1O96005 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.53□□□□□ -2
CLPTM1O96005 SCGB1D5P-201ENST00000515134 247 ntBASIC2.53□□□□□ -2
CLPTM1O96005 Y_RNA.682-201ENST00000516457 100 ntBASIC2.53□□□□□ -2
CLPTM1O96005 Y_RNA.687-201ENST00000516558 91 ntBASIC2.53□□□□□ -2
CLPTM1O96005 AC069113.1-201ENST00000517763 267 ntBASIC2.53□□□□□ -2
CLPTM1O96005 AC104576.1-201ENST00000524225 88 ntBASIC2.53□□□□□ -2
CLPTM1O96005 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CLPTM1O96005 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.53□□□□□ -2
CLPTM1O96005 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.53□□□□□ -2
CLPTM1O96005 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.53□□□□□ -2
CLPTM1O96005 RPS3AP23-202ENST00000574601 686 ntBASIC2.53□□□□□ -2
CLPTM1O96005 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.53□□□□□ -2
CLPTM1O96005 OR1M4P-201ENST00000589199 287 ntBASIC2.53□□□□□ -2
CLPTM1O96005 AL117336.2-201ENST00000602435 335 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-6P-201ENST00000606623 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 AC135507.2-201ENST00000612443 309 ntBASIC2.53□□□□□ -2
CLPTM1O96005 AC004852.3-201ENST00000614131 326 ntBASIC2.53□□□□□ -2
CLPTM1O96005 uc_338.15-201ENST00000615470 191 ntBASIC2.53□□□□□ -2
CLPTM1O96005 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.53□□□□□ -2
CLPTM1O96005 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.53□□□□□ -2
CLPTM1O96005 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
CLPTM1O96005 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.52□□□□□ -2.01
CLPTM1O96005 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CLPTM1O96005 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.52□□□□□ -2.01
CLPTM1O96005 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLPTM1O96005 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLPTM1O96005 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLPTM1O96005 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLPTM1O96005 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CLPTM1O96005 RNU6-797P-201ENST00000363101 109 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLPTM1O96005 RNU6-1013P-201ENST00000384180 107 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 TOMM20P4-201ENST00000427861 435 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.52□□□□□ -2.01
CLPTM1O96005 AMD1P1-201ENST00000457220 922 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.52□□□□□ -2.01
CLPTM1O96005 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLPTM1O96005 MTND3P22-201ENST00000510932 243 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 AP005639.2-201ENST00000527592 928 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.52□□□□□ -2.01
CLPTM1O96005 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.52□□□□□ -2.01
CLPTM1O96005 AC093027.1-201ENST00000546698 429 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.52□□□□□ -2.01
CLPTM1O96005 AC023043.2-201ENST00000589678 1026 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 AL138726.1-201ENST00000614873 333 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 UCA1.1-201ENST00000620952 75 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 AC138627.2-201ENST00000624202 601 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 AL137790.1-201ENST00000634283 177 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 AC099654.5-201ENST00000636479 350 ntBASIC2.52□□□□□ -2.01
CLPTM1O96005 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLPTM1O96005 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CLPTM1O96005 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CLPTM1O96005 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CLPTM1O96005 RNU4-73P-201ENST00000363164 141 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 Y_RNA.135-201ENST00000363439 95 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 MIR518D-201ENST00000385014 87 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 MIR34A-201ENST00000385130 110 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AL513475.1-201ENST00000406602 315 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 RAP1BP3-201ENST00000407180 549 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 MIR548F5-201ENST00000408421 86 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.51□□□□□ -2.01
CLPTM1O96005 NDUFS5P4-201ENST00000412983 318 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AL365496.1-201ENST00000426885 215 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.51□□□□□ -2.01
CLPTM1O96005 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.51□□□□□ -2.01
CLPTM1O96005 AC098831.1-201ENST00000440661 216 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.51□□□□□ -2.01
CLPTM1O96005 AL359672.1-201ENST00000442302 409 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AC009296.1-201ENST00000443146 155 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 RPL32P28-201ENST00000443577 397 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AC092001.1-201ENST00000453012 261 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AC008526.1-201ENST00000509149 338 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.51□□□□□ -2.01
CLPTM1O96005 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.51□□□□□ -2.01
CLPTM1O96005 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.51□□□□□ -2.01
CLPTM1O96005 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.51□□□□□ -2.01
CLPTM1O96005 RNA5SP454-201ENST00000517231 127 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLPTM1O96005 AC087854.1-201ENST00000519706 414 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms