Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MTCO3P5-201ENST00000433620 714 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.78□□□□□ -2.12
CTDNEP1O95476 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.78□□□□□ -2.12
CTDNEP1O95476 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.78□□□□□ -2.12
CTDNEP1O95476 AL360271.2-201ENST00000447710 161 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.78□□□□□ -2.12
CTDNEP1O95476 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 MTCO2P18-201ENST00000457151 658 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 PMCHL2-203ENST00000457791 237 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 AL162395.1-201ENST00000457882 422 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 AC112206.3-201ENST00000514578 389 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 SNORD19.2-201ENST00000516978 73 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 SNORA31.25-201ENST00000517242 134 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 ADI1P3-201ENST00000549509 470 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 MTND1P15-201ENST00000579262 949 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 MIR4287-201ENST00000579398 78 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 MIR4775-201ENST00000581168 75 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 MIR3611-201ENST00000584484 83 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 AC025449.1-201ENST00000603896 529 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 AL355598.1-201ENST00000604169 202 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 AC080013.6-201ENST00000606185 215 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 AC109347.2-201ENST00000610220 349 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 uc_338.5-201ENST00000611839 155 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 AC093783.1-201ENST00000612976 329 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 AL359547.2-201ENST00000615810 418 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 MIR6134-201ENST00000617606 109 ntBASIC1.78□□□□□ -2.12
CTDNEP1O95476 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.78□□□□□ -2.12
CTDNEP1O95476 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.78□□□□□ -2.12
CTDNEP1O95476 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.77□□□□□ -2.13
CTDNEP1O95476 RNU6-179P-201ENST00000363350 107 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 RNU6-898P-201ENST00000365627 104 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 RNU1-148P-201ENST00000384472 162 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC068050.1-201ENST00000394891 380 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.77□□□□□ -2.13
CTDNEP1O95476 BTF3L4P1-201ENST00000413813 468 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC016831.2-201ENST00000417179 352 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 MTCYBP5-201ENST00000423752 1135 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 RPL30P4-201ENST00000429309 333 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC092001.1-201ENST00000453012 261 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.77□□□□□ -2.13
CTDNEP1O95476 AL583843.1-201ENST00000456070 346 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AL122001.1-201ENST00000457027 370 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.77□□□□□ -2.13
CTDNEP1O95476 MTCO3P9-201ENST00000506989 781 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC118273.2-201ENST00000532092 465 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 OR5AL2P-201ENST00000532185 920 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC135279.1-201ENST00000543493 504 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.77□□□□□ -2.13
CTDNEP1O95476 AL121821.2-201ENST00000556081 394 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC105245.1-201ENST00000581934 244 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 MIR4765-201ENST00000585007 77 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AL109918.3-201ENST00000603072 338 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AL391646.1-201ENST00000603860 190 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC245008.1-201ENST00000608123 476 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC011939.3-201ENST00000613686 466 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 U4atac.1-201ENST00000618345 95 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 AC138649.3-201ENST00000622154 254 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 CDC27P3-201ENST00000635418 1910 ntBASIC1.77□□□□□ -2.13
CTDNEP1O95476 RNU6-1097P-201ENST00000363586 107 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 RNU6-384P-201ENST00000364900 104 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 RNU6-456P-201ENST00000384493 107 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 MIR454-201ENST00000390180 115 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 AC016907.1-201ENST00000419483 435 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.76□□□□□ -2.13
CTDNEP1O95476 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.76□□□□□ -2.13
CTDNEP1O95476 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.76□□□□□ -2.13
CTDNEP1O95476 AL161651.1-201ENST00000440882 223 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 AC079781.2-201ENST00000446424 169 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CTDNEP1O95476 RPS29P15-201ENST00000458329 171 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 AC104806.1-201ENST00000508720 308 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 AC091133.4-201ENST00000511142 308 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 RNU1-86P-201ENST00000516108 154 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 RNU1-107P-201ENST00000516617 154 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 RNU2-44P-201ENST00000516795 194 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 SNORA31.23-201ENST00000517219 133 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.76□□□□□ -2.13
CTDNEP1O95476 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.76□□□□□ -2.13
CTDNEP1O95476 AL391840.1-201ENST00000571144 367 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 NBR2-204ENST00000587322 63 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 AL645939.4-201ENST00000604495 135 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 BX248123.2-201ENST00000606318 124 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 uc_338.14-201ENST00000613162 166 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 AC072046.2-201ENST00000618366 268 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 AC048344.4-201ENST00000619744 527 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 ADAM3A-203ENST00000461344 2157 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 MTND5P17-201ENST00000418405 1603 ntBASIC1.76□□□□□ -2.13
CTDNEP1O95476 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CTDNEP1O95476 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
CTDNEP1O95476 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
CTDNEP1O95476 RNU4-75P-201ENST00000364621 146 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 RNU6-395P-201ENST00000365662 106 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 RNU6-550P-201ENST00000391057 101 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 RNU2-9P-201ENST00000410194 145 ntBASIC1.75□□□□□ -2.13
CTDNEP1O95476 AL353193.1-201ENST00000421444 268 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms