Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC092447.10-201ENST00000620607 1652 ntBASIC1.06□□□□□ -2.24
PCF11O94913 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PCF11O94913 RNU6-1164P-201ENST00000364428 107 ntBASIC1.05□□□□□ -2.24
PCF11O94913 RNA5SP25-201ENST00000410815 110 ntBASIC1.05□□□□□ -2.24
PCF11O94913 RPL37P10-201ENST00000412884 288 ntBASIC1.05□□□□□ -2.24
PCF11O94913 AC092634.2-201ENST00000428146 1010 ntBASIC1.05□□□□□ -2.24
PCF11O94913 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.05□□□□□ -2.24
PCF11O94913 CR769776.1-201ENST00000441254 787 ntBASIC1.05□□□□□ -2.24
PCF11O94913 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
PCF11O94913 AC112198.4-201ENST00000515450 351 ntBASIC1.05□□□□□ -2.24
PCF11O94913 RNU2-53P-201ENST00000516257 147 ntBASIC1.05□□□□□ -2.24
PCF11O94913 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.05□□□□□ -2.24
PCF11O94913 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.05□□□□□ -2.24
PCF11O94913 SLC2A13P1-201ENST00000531560 322 ntBASIC1.05□□□□□ -2.24
PCF11O94913 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.05□□□□□ -2.24
PCF11O94913 SNRPGP1-201ENST00000553864 222 ntBASIC1.05□□□□□ -2.24
PCF11O94913 AC023932.2-201ENST00000603176 175 ntBASIC1.05□□□□□ -2.24
PCF11O94913 BNIP3P9-201ENST00000603714 553 ntBASIC1.05□□□□□ -2.24
PCF11O94913 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.05□□□□□ -2.24
PCF11O94913 SNORA48.1-201ENST00000390879 135 ntBASIC1.04□□□□□ -2.24
PCF11O94913 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.04□□□□□ -2.24
PCF11O94913 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.04□□□□□ -2.24
PCF11O94913 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.04□□□□□ -2.24
PCF11O94913 AC026414.1-201ENST00000504046 698 ntBASIC1.04□□□□□ -2.24
PCF11O94913 AC022784.5-201ENST00000522241 437 ntBASIC1.04□□□□□ -2.24
PCF11O94913 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.04□□□□□ -2.24
PCF11O94913 AL445435.1-201ENST00000604232 665 ntBASIC1.04□□□□□ -2.24
PCF11O94913 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.04□□□□□ -2.24
PCF11O94913 AP000676.3-201ENST00000623299 569 ntBASIC1.04□□□□□ -2.24
PCF11O94913 RNU6-1010P-201ENST00000362757 107 ntBASIC1.04□□□□□ -2.24
PCF11O94913 RNU6-414P-201ENST00000363705 104 ntBASIC1.04□□□□□ -2.24
PCF11O94913 SNORD1A-201ENST00000364968 72 ntBASIC1.04□□□□□ -2.24
PCF11O94913 MIR597-201ENST00000384968 97 ntBASIC1.04□□□□□ -2.24
PCF11O94913 AC119751.3-201ENST00000399720 670 ntBASIC1.04□□□□□ -2.24
PCF11O94913 AC008267.5-201ENST00000424928 265 ntBASIC1.04□□□□□ -2.24
PCF11O94913 AC092628.1-201ENST00000436250 252 ntBASIC1.04□□□□□ -2.24
PCF11O94913 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.04□□□□□ -2.24
PCF11O94913 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.04□□□□□ -2.24
PCF11O94913 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
PCF11O94913 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.04□□□□□ -2.24
PCF11O94913 RPF2P2-201ENST00000504693 896 ntBASIC1.04□□□□□ -2.24
PCF11O94913 AC103851.1-201ENST00000506833 274 ntBASIC1.04□□□□□ -2.24
PCF11O94913 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.04□□□□□ -2.24
PCF11O94913 AP003122.4-201ENST00000530980 758 ntBASIC1.04□□□□□ -2.24
PCF11O94913 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.04□□□□□ -2.24
PCF11O94913 MTND4P21-201ENST00000453886 1357 ntBASIC1.04□□□□□ -2.24
PCF11O94913 RNU6-188P-201ENST00000364207 107 ntBASIC1.03□□□□□ -2.24
PCF11O94913 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.03□□□□□ -2.24
PCF11O94913 USP9YP17-201ENST00000444617 696 ntBASIC1.03□□□□□ -2.24
PCF11O94913 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.03□□□□□ -2.24
PCF11O94913 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.03□□□□□ -2.24
PCF11O94913 AP003484.1-201ENST00000530974 250 ntBASIC1.03□□□□□ -2.24
PCF11O94913 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.03□□□□□ -2.24
PCF11O94913 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.03□□□□□ -2.24
PCF11O94913 CLIC4P2-201ENST00000601934 717 ntBASIC1.03□□□□□ -2.24
PCF11O94913 AC026741.1-201ENST00000605892 482 ntBASIC1.03□□□□□ -2.24
PCF11O94913 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.02□□□□□ -2.25
PCF11O94913 RNU6-898P-201ENST00000365627 104 ntBASIC1.02□□□□□ -2.25
PCF11O94913 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
PCF11O94913 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
PCF11O94913 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
PCF11O94913 MTND5P14-201ENST00000441481 1267 ntBASIC1.02□□□□□ -2.25
PCF11O94913 RPL18AP17-201ENST00000455326 198 ntBASIC1.02□□□□□ -2.25
PCF11O94913 RPL30P7-201ENST00000479312 323 ntBASIC1.02□□□□□ -2.25
PCF11O94913 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.02□□□□□ -2.25
PCF11O94913 AL158032.1-201ENST00000605401 106 ntBASIC1.02□□□□□ -2.25
PCF11O94913 FARSBP1-201ENST00000435808 1778 ntBASIC1.02□□□□□ -2.25
PCF11O94913 RNU6-360P-201ENST00000390944 104 ntBASIC1.01□□□□□ -2.25
PCF11O94913 RNU6-278P-201ENST00000390945 109 ntBASIC1.01□□□□□ -2.25
PCF11O94913 RPL23AP32-201ENST00000395315 459 ntBASIC1.01□□□□□ -2.25
PCF11O94913 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.01□□□□□ -2.25
PCF11O94913 AC079140.2-201ENST00000506193 142 ntBASIC1.01□□□□□ -2.25
PCF11O94913 RNU6-572P-201ENST00000516724 80 ntBASIC1.01□□□□□ -2.25
PCF11O94913 AC073410.2-201ENST00000603240 332 ntBASIC1.01□□□□□ -2.25
PCF11O94913 HSPE1P19-201ENST00000603327 295 ntBASIC1.01□□□□□ -2.25
PCF11O94913 MIR8084-201ENST00000614105 89 ntBASIC1.01□□□□□ -2.25
PCF11O94913 AC097460.3-201ENST00000623099 442 ntBASIC1.01□□□□□ -2.25
PCF11O94913 AC093648.1-201ENST00000623546 606 ntBASIC1.01□□□□□ -2.25
PCF11O94913 Z69720.2-201ENST00000624755 279 ntBASIC1.01□□□□□ -2.25
PCF11O94913 Y_RNA.99-201ENST00000363138 105 ntBASIC1□□□□□ -2.25
PCF11O94913 MIR1267-201ENST00000408723 78 ntBASIC1□□□□□ -2.25
PCF11O94913 AL035666.1-201ENST00000446195 348 ntBASIC1□□□□□ -2.25
PCF11O94913 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1□□□□□ -2.25
PCF11O94913 RPS26P55-201ENST00000471178 356 ntBASIC1□□□□□ -2.25
PCF11O94913 RPL39P36-201ENST00000490784 156 ntBASIC1□□□□□ -2.25
PCF11O94913 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1□□□□□ -2.25
PCF11O94913 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1□□□□□ -2.25
PCF11O94913 SNORA31.3-201ENST00000516029 96 ntBASIC1□□□□□ -2.25
PCF11O94913 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1□□□□□ -2.25
PCF11O94913 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1□□□□□ -2.25
PCF11O94913 MTCO3P15-201ENST00000526563 574 ntBASIC1□□□□□ -2.25
PCF11O94913 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
PCF11O94913 MIR3912-201ENST00000577566 105 ntBASIC1□□□□□ -2.25
PCF11O94913 AC012065.4-201ENST00000602445 679 ntBASIC1□□□□□ -2.25
PCF11O94913 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1□□□□□ -2.25
PCF11O94913 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1□□□□□ -2.25
PCF11O94913 AL135790.2-201ENST00000437701 267 ntBASIC1□□□□□ -2.25
PCF11O94913 AL158053.1-201ENST00000441503 453 ntBASIC1□□□□□ -2.25
PCF11O94913 MTND1P31-201ENST00000449206 961 ntBASIC1□□□□□ -2.25
PCF11O94913 RNU7-59P-201ENST00000459101 61 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms