Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MRPS18CP6-201ENST00000423587 223 ntBASIC2.81□□□□□ -1.96
LDB3O75112 HMGB1P9-201ENST00000429856 646 ntBASIC2.81□□□□□ -1.96
LDB3O75112 MYL8P-204ENST00000431574 518 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AL359672.1-201ENST00000442302 409 ntBASIC2.81□□□□□ -1.96
LDB3O75112 FTH1P25-201ENST00000447665 469 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.81□□□□□ -1.96
LDB3O75112 AP002884.2-201ENST00000471647 395 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AC139453.3-201ENST00000493276 369 ntBASIC2.81□□□□□ -1.96
LDB3O75112 MTND4LP22-201ENST00000508209 276 ntBASIC2.81□□□□□ -1.96
LDB3O75112 RNU6-976P-201ENST00000516086 111 ntBASIC2.81□□□□□ -1.96
LDB3O75112 RNU1-86P-201ENST00000516108 154 ntBASIC2.81□□□□□ -1.96
LDB3O75112 RNU1-107P-201ENST00000516617 154 ntBASIC2.81□□□□□ -1.96
LDB3O75112 Y_RNA.708-201ENST00000516950 96 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.81□□□□□ -1.96
LDB3O75112 CYCSP27-201ENST00000527643 293 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AP002404.1-201ENST00000532005 451 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AC026371.1-201ENST00000551867 419 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.81□□□□□ -1.96
LDB3O75112 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.81□□□□□ -1.96
LDB3O75112 MIR4325-201ENST00000583049 90 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AL133393.1-201ENST00000603277 287 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AC123912.5-201ENST00000605470 343 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AC011890.2-201ENST00000613393 294 ntBASIC2.81□□□□□ -1.96
LDB3O75112 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LDB3O75112 CDC27P3-201ENST00000635418 1910 ntBASIC2.81□□□□□ -1.96
LDB3O75112 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LDB3O75112 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LDB3O75112 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LDB3O75112 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.8□□□□□ -1.96
LDB3O75112 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LDB3O75112 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LDB3O75112 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LDB3O75112 Y_RNA.158-201ENST00000363651 101 ntBASIC2.8□□□□□ -1.96
LDB3O75112 RNU6-593P-201ENST00000364716 112 ntBASIC2.8□□□□□ -1.96
LDB3O75112 CD24P4-201ENST00000382840 243 ntBASIC2.8□□□□□ -1.96
LDB3O75112 RNU6-128P-201ENST00000383976 107 ntBASIC2.8□□□□□ -1.96
LDB3O75112 MIR128-1-201ENST00000384921 82 ntBASIC2.8□□□□□ -1.96
LDB3O75112 SNORA48.5-201ENST00000391143 135 ntBASIC2.8□□□□□ -1.96
LDB3O75112 SAR1AP2-201ENST00000392696 594 ntBASIC2.8□□□□□ -1.96
LDB3O75112 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB3O75112 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.8□□□□□ -1.96
LDB3O75112 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB3O75112 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LDB3O75112 AC022018.1-201ENST00000430685 241 ntBASIC2.8□□□□□ -1.96
LDB3O75112 AL714022.1-201ENST00000439897 151 ntBASIC2.8□□□□□ -1.96
LDB3O75112 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB3O75112 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB3O75112 SNORD5.1-201ENST00000458800 75 ntBASIC2.8□□□□□ -1.96
LDB3O75112 RPL27AP5-201ENST00000469428 449 ntBASIC2.8□□□□□ -1.96
LDB3O75112 RN7SL633P-201ENST00000488974 297 ntBASIC2.8□□□□□ -1.96
LDB3O75112 AC010265.1-201ENST00000513509 211 ntBASIC2.8□□□□□ -1.96
LDB3O75112 RNU6-470P-201ENST00000515954 104 ntBASIC2.8□□□□□ -1.96
LDB3O75112 SNORA31.21-201ENST00000517180 77 ntBASIC2.8□□□□□ -1.96
LDB3O75112 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.8□□□□□ -1.96
LDB3O75112 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.8□□□□□ -1.96
LDB3O75112 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.8□□□□□ -1.96
LDB3O75112 LRRC37A5P-203ENST00000580181 585 ntBASIC2.8□□□□□ -1.96
LDB3O75112 AC006157.1-201ENST00000611750 366 ntBASIC2.8□□□□□ -1.96
LDB3O75112 AL161629.2-201ENST00000615347 275 ntBASIC2.8□□□□□ -1.96
LDB3O75112 AL031601.2-202ENST00000622650 282 ntBASIC2.8□□□□□ -1.96
LDB3O75112 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LDB3O75112 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LDB3O75112 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LDB3O75112 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
LDB3O75112 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LDB3O75112 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.79□□□□□ -1.96
LDB3O75112 SNORD62.1-201ENST00000362541 86 ntBASIC2.79□□□□□ -1.96
LDB3O75112 Y_RNA.193-201ENST00000363979 102 ntBASIC2.79□□□□□ -1.96
LDB3O75112 Y_RNA.252-201ENST00000364556 101 ntBASIC2.79□□□□□ -1.96
LDB3O75112 Y_RNA.364-201ENST00000365532 101 ntBASIC2.79□□□□□ -1.96
LDB3O75112 RNU6-196P-201ENST00000384315 107 ntBASIC2.79□□□□□ -1.96
LDB3O75112 Y_RNA.557-201ENST00000384680 107 ntBASIC2.79□□□□□ -1.96
LDB3O75112 SNORA48.2-201ENST00000390926 124 ntBASIC2.79□□□□□ -1.96
LDB3O75112 SNORA40C-201ENST00000391285 128 ntBASIC2.79□□□□□ -1.96
LDB3O75112 MIR888-201ENST00000401186 77 ntBASIC2.79□□□□□ -1.96
LDB3O75112 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB3O75112 AC008267.5-201ENST00000424928 265 ntBASIC2.79□□□□□ -1.96
LDB3O75112 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB3O75112 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB3O75112 RPL37P4-201ENST00000448908 268 ntBASIC2.79□□□□□ -1.96
LDB3O75112 NDUFB1P2-201ENST00000449477 176 ntBASIC2.79□□□□□ -1.96
LDB3O75112 AC022493.2-201ENST00000506122 481 ntBASIC2.79□□□□□ -1.96
LDB3O75112 AC096745.1-201ENST00000509945 370 ntBASIC2.79□□□□□ -1.96
LDB3O75112 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.79□□□□□ -1.96
LDB3O75112 RNU6-764P-201ENST00000516396 105 ntBASIC2.79□□□□□ -1.96
LDB3O75112 SNORA31.19-201ENST00000517079 126 ntBASIC2.79□□□□□ -1.96
LDB3O75112 RNU1-54P-201ENST00000517181 120 ntBASIC2.79□□□□□ -1.96
LDB3O75112 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.79□□□□□ -1.96
LDB3O75112 AC087854.1-201ENST00000519706 414 ntBASIC2.79□□□□□ -1.96
LDB3O75112 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB3O75112 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB3O75112 AC104695.3-201ENST00000604052 296 ntBASIC2.79□□□□□ -1.96
LDB3O75112 AL355598.1-201ENST00000604169 202 ntBASIC2.79□□□□□ -1.96
LDB3O75112 RNU6-85P-201ENST00000605989 107 ntBASIC2.79□□□□□ -1.96
LDB3O75112 PISRT1.1-201ENST00000616930 107 ntBASIC2.79□□□□□ -1.96
LDB3O75112 AC087588.2-201ENST00000617667 426 ntBASIC2.79□□□□□ -1.96
LDB3O75112 AL162373.1-201ENST00000620433 407 ntBASIC2.79□□□□□ -1.96
LDB3O75112 AL078596.1-201ENST00000624856 447 ntBASIC2.79□□□□□ -1.96
LDB3O75112 SNORA50A-202ENST00000629536 136 ntBASIC2.79□□□□□ -1.96
LDB3O75112 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms