Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 USP9YP20-201ENST00000419224 558 ntBASIC2.52□□□□□ -2.01
SSX4O60224 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.52□□□□□ -2.01
SSX4O60224 AL591043.1-201ENST00000432461 424 ntBASIC2.52□□□□□ -2.01
SSX4O60224 MICF-203ENST00000432679 129 ntBASIC2.52□□□□□ -2.01
SSX4O60224 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
SSX4O60224 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.52□□□□□ -2.01
SSX4O60224 AC013470.1-201ENST00000453438 462 ntBASIC2.52□□□□□ -2.01
SSX4O60224 AC007547.1-201ENST00000462177 490 ntBASIC2.52□□□□□ -2.01
SSX4O60224 AC133134.1-201ENST00000466800 359 ntBASIC2.52□□□□□ -2.01
SSX4O60224 AC117440.1-201ENST00000474107 571 ntBASIC2.52□□□□□ -2.01
SSX4O60224 RPPH1-2P-201ENST00000516688 293 ntBASIC2.52□□□□□ -2.01
SSX4O60224 RN7SKP40-201ENST00000517211 242 ntBASIC2.52□□□□□ -2.01
SSX4O60224 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.52□□□□□ -2.01
SSX4O60224 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.52□□□□□ -2.01
SSX4O60224 AP005597.4-201ENST00000526762 229 ntBASIC2.52□□□□□ -2.01
SSX4O60224 MIR3199-1-201ENST00000582434 88 ntBASIC2.52□□□□□ -2.01
SSX4O60224 AC005046.1-201ENST00000608515 625 ntBASIC2.52□□□□□ -2.01
SSX4O60224 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.52□□□□□ -2.01
SSX4O60224 FAM157A-202ENST00000615155 405 ntBASIC2.52□□□□□ -2.01
SSX4O60224 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SSX4O60224 Z75746.1-201ENST00000440243 2080 ntBASIC2.52□□□□□ -2.01
SSX4O60224 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.52□□□□□ -2.01
SSX4O60224 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSX4O60224 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SSX4O60224 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSX4O60224 MIR449A-201ENST00000362113 91 ntBASIC2.51□□□□□ -2.01
SSX4O60224 RNU6-1252P-201ENST00000363054 104 ntBASIC2.51□□□□□ -2.01
SSX4O60224 RNU6-336P-201ENST00000364891 107 ntBASIC2.51□□□□□ -2.01
SSX4O60224 MIR218-1-201ENST00000384999 110 ntBASIC2.51□□□□□ -2.01
SSX4O60224 MIR450B-201ENST00000401182 78 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AL139095.1-201ENST00000404326 391 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AL162578.1-201ENST00000406202 378 ntBASIC2.51□□□□□ -2.01
SSX4O60224 RNU2-25P-201ENST00000411041 191 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.51□□□□□ -2.01
SSX4O60224 AC138623.1-201ENST00000418060 216 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AC097463.2-201ENST00000421074 142 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.51□□□□□ -2.01
SSX4O60224 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.51□□□□□ -2.01
SSX4O60224 MTND1P2-201ENST00000430604 821 ntBASIC2.51□□□□□ -2.01
SSX4O60224 NDUFA5P4-201ENST00000436704 385 ntBASIC2.51□□□□□ -2.01
SSX4O60224 RPL22P13-201ENST00000493291 347 ntBASIC2.51□□□□□ -2.01
SSX4O60224 FAM206BP-201ENST00000510179 541 ntBASIC2.51□□□□□ -2.01
SSX4O60224 RNA5SP112-201ENST00000515937 99 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.51□□□□□ -2.01
SSX4O60224 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.51□□□□□ -2.01
SSX4O60224 AC079598.5-201ENST00000547460 117 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AC103996.1-201ENST00000555468 102 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AC090897.2-201ENST00000581715 130 ntBASIC2.51□□□□□ -2.01
SSX4O60224 MIR4672-201ENST00000583126 81 ntBASIC2.51□□□□□ -2.01
SSX4O60224 MIR3117-201ENST00000584034 78 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AC096772.1-201ENST00000609146 564 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AC090115.4-201ENST00000609970 188 ntBASIC2.51□□□□□ -2.01
SSX4O60224 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
SSX4O60224 AC006504.8-201ENST00000621046 635 ntBASIC2.51□□□□□ -2.01
SSX4O60224 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SSX4O60224 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SSX4O60224 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX4O60224 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.5□□□□□ -2.01
SSX4O60224 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.5□□□□□ -2.01
SSX4O60224 Y_RNA.100-201ENST00000363141 102 ntBASIC2.5□□□□□ -2.01
SSX4O60224 RNU6-254P-201ENST00000363377 107 ntBASIC2.5□□□□□ -2.01
SSX4O60224 SNORD113-7-201ENST00000363762 77 ntBASIC2.5□□□□□ -2.01
SSX4O60224 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSX4O60224 RNU6-851P-201ENST00000384565 107 ntBASIC2.5□□□□□ -2.01
SSX4O60224 Y_RNA.530-201ENST00000384587 101 ntBASIC2.5□□□□□ -2.01
SSX4O60224 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSX4O60224 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.5□□□□□ -2.01
SSX4O60224 RPL30P16-201ENST00000419341 429 ntBASIC2.5□□□□□ -2.01
SSX4O60224 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSX4O60224 RPL30P4-201ENST00000429309 333 ntBASIC2.5□□□□□ -2.01
SSX4O60224 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.5□□□□□ -2.01
SSX4O60224 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSX4O60224 AC105272.1-201ENST00000438604 198 ntBASIC2.5□□□□□ -2.01
SSX4O60224 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.5□□□□□ -2.01
SSX4O60224 AC007969.2-201ENST00000441891 191 ntBASIC2.5□□□□□ -2.01
SSX4O60224 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSX4O60224 RNU7-66P-201ENST00000459469 62 ntBASIC2.5□□□□□ -2.01
SSX4O60224 RPS27P27-201ENST00000498779 255 ntBASIC2.5□□□□□ -2.01
SSX4O60224 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.5□□□□□ -2.01
SSX4O60224 AK3P2-201ENST00000507976 429 ntBASIC2.5□□□□□ -2.01
SSX4O60224 RNU6-358P-201ENST00000516564 75 ntBASIC2.5□□□□□ -2.01
SSX4O60224 SCARNA3-201ENST00000517097 143 ntBASIC2.5□□□□□ -2.01
SSX4O60224 RNU6-1314P-201ENST00000517139 104 ntBASIC2.5□□□□□ -2.01
SSX4O60224 AF235103.2-201ENST00000525753 346 ntBASIC2.5□□□□□ -2.01
SSX4O60224 AC010186.2-204ENST00000537668 439 ntBASIC2.5□□□□□ -2.01
SSX4O60224 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.5□□□□□ -2.01
SSX4O60224 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.5□□□□□ -2.01
SSX4O60224 MIR7157-201ENST00000635801 60 ntBASIC2.5□□□□□ -2.01
SSX4O60224 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSX4O60224 AL136360.1-201ENST00000503377 1900 ntBASIC2.5□□□□□ -2.01
SSX4O60224 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SSX4O60224 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.49□□□□□ -2.01
SSX4O60224 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.49□□□□□ -2.01
SSX4O60224 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SSX4O60224 Y_RNA.86-201ENST00000363020 111 ntBASIC2.49□□□□□ -2.01
SSX4O60224 SNORD114-19-201ENST00000363072 75 ntBASIC2.49□□□□□ -2.01
SSX4O60224 RNU6-486P-201ENST00000363116 107 ntBASIC2.49□□□□□ -2.01
SSX4O60224 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
SSX4O60224 RNA5SP390-201ENST00000410191 113 ntBASIC2.49□□□□□ -2.01
SSX4O60224 RNU6-1148P-201ENST00000410992 104 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms