Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN3O15551 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
CLDN3O15551 AC241585.2-209ENST00000638217 143 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 FARSBP1-201ENST00000435808 1778 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
CLDN3O15551 RNU6-527P-201ENST00000363425 104 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 RNU6-944P-201ENST00000364023 107 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 SNORA62.1-201ENST00000364287 154 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 Y_RNA.367-201ENST00000365544 101 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 BTF3L4P1-201ENST00000413813 468 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN3O15551 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
CLDN3O15551 HMGN2P19-201ENST00000425149 265 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 AL591043.1-201ENST00000432461 424 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.98□□□□□ -2.09
CLDN3O15551 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.98□□□□□ -2.09
CLDN3O15551 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN3O15551 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN3O15551 snoU13.14-201ENST00000459372 104 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 AC104564.1-201ENST00000493028 407 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.98□□□□□ -2.09
CLDN3O15551 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN3O15551 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.98□□□□□ -2.09
CLDN3O15551 AC109446.2-201ENST00000567872 497 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 MIR3915-201ENST00000578518 97 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN3O15551 AC243960.4-201ENST00000600532 288 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 AL109918.3-201ENST00000603072 338 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 MIR98-201ENST00000606724 119 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 AC087683.2-201ENST00000611384 326 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 AC005296.1-201ENST00000616145 209 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 RMST_7.1-201ENST00000621935 268 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 AL603839.4-201ENST00000624658 1005 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLDN3O15551 MTND5P17-201ENST00000418405 1603 ntBASIC1.98□□□□□ -2.09
CLDN3O15551 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN3O15551 RNU6-743P-201ENST00000364151 106 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 MIR29B2-201ENST00000385055 81 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 MIR9-3-201ENST00000385084 90 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 MIR1294-201ENST00000408503 142 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.97□□□□□ -2.09
CLDN3O15551 AL365203.2-201ENST00000423444 196 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 CYCSP46-201ENST00000423569 204 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 AL591806.2-201ENST00000433122 173 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN3O15551 GPR143P-201ENST00000434155 205 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 AC079781.2-201ENST00000446424 169 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 RPL23AP6-201ENST00000446637 472 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 RPL39P29-201ENST00000447779 157 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 AL033528.1-201ENST00000453780 140 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 RPL23AP3-201ENST00000453844 468 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 MTCYBP1-201ENST00000454315 1119 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 PRELID3BP1-201ENST00000457142 540 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 RPS29P11-201ENST00000496507 171 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 AC074344.1-201ENST00000512823 224 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 RN7SKP256-201ENST00000517201 314 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN3O15551 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.97□□□□□ -2.09
CLDN3O15551 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 MIR4760-201ENST00000585040 80 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 AC078795.2-201ENST00000602835 1252 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 AC005034.5-201ENST00000604219 466 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 AP001506.1-201ENST00000615444 211 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 RMST_4.1-201ENST00000616886 107 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 AL354685.2-201ENST00000448218 1447 ntBASIC1.97□□□□□ -2.09
CLDN3O15551 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
CLDN3O15551 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN3O15551 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLDN3O15551 RNU5A-2P-201ENST00000384337 116 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 RNU6-45P-201ENST00000384471 107 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN3O15551 RPL31P35-201ENST00000431058 377 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 AC245102.2-201ENST00000448956 180 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.96□□□□□ -2.1
CLDN3O15551 GAPDHP17-201ENST00000449858 1001 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 AL353752.1-201ENST00000454946 260 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 MTND2P33-201ENST00000506452 1031 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 DUXAP5-201ENST00000529668 529 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 AC022616.8-201ENST00000533569 253 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN3O15551 MTATP6P24-201ENST00000576835 677 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CLDN3O15551 AC091304.6-201ENST00000619761 202 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 AC097372.5-201ENST00000623665 376 ntBASIC1.96□□□□□ -2.1
CLDN3O15551 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CLDN3O15551 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.95□□□□□ -2.1
CLDN3O15551 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN3O15551 RNU6-611P-201ENST00000384276 104 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 MIR29C-201ENST00000385231 88 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 MT-TH-201ENST00000387441 69 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 RNU6-550P-201ENST00000391057 101 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 BTF3L4P2-201ENST00000392798 346 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 RNU2-48P-201ENST00000410694 191 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 RNU6-607P-201ENST00000411283 108 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 AL590556.1-201ENST00000423231 483 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 USP9YP18-201ENST00000425912 695 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 AC009961.2-201ENST00000435771 251 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms