Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM1O15116 AC073539.2-201ENST00000597113 165 ntBASIC1.59□□□□□ -2.15
LSM1O15116 AC022022.2-201ENST00000602989 360 ntBASIC1.59□□□□□ -2.15
LSM1O15116 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM1O15116 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.59□□□□□ -2.15
LSM1O15116 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.59□□□□□ -2.15
LSM1O15116 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.59□□□□□ -2.15
LSM1O15116 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
LSM1O15116 SNORA62.1-201ENST00000364287 154 ntBASIC1.58□□□□□ -2.16
LSM1O15116 BTF3L4P2-201ENST00000392798 346 ntBASIC1.58□□□□□ -2.16
LSM1O15116 RPL23AP32-201ENST00000395315 459 ntBASIC1.58□□□□□ -2.16
LSM1O15116 Y_RNA.597-201ENST00000410463 100 ntBASIC1.58□□□□□ -2.16
LSM1O15116 RNU6-955P-201ENST00000410497 104 ntBASIC1.58□□□□□ -2.16
LSM1O15116 CYCSP33-201ENST00000414485 327 ntBASIC1.58□□□□□ -2.16
LSM1O15116 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM1O15116 AC000111.3-201ENST00000433478 193 ntBASIC1.58□□□□□ -2.16
LSM1O15116 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM1O15116 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM1O15116 RAP1BP2-201ENST00000478270 544 ntBASIC1.58□□□□□ -2.16
LSM1O15116 AC104806.1-201ENST00000508720 308 ntBASIC1.58□□□□□ -2.16
LSM1O15116 RNU6-250P-201ENST00000516958 103 ntBASIC1.58□□□□□ -2.16
LSM1O15116 AP005660.1-201ENST00000522972 293 ntBASIC1.58□□□□□ -2.16
LSM1O15116 AC022878.1-201ENST00000530684 149 ntBASIC1.58□□□□□ -2.16
LSM1O15116 AL356057.1-201ENST00000533798 831 ntBASIC1.58□□□□□ -2.16
LSM1O15116 MIR3169-201ENST00000578032 83 ntBASIC1.58□□□□□ -2.16
LSM1O15116 CYP2C61P-201ENST00000604072 290 ntBASIC1.58□□□□□ -2.16
LSM1O15116 AL022345.1-201ENST00000607292 135 ntBASIC1.58□□□□□ -2.16
LSM1O15116 AC068944.2-201ENST00000610373 403 ntBASIC1.58□□□□□ -2.16
LSM1O15116 uc_338.5-201ENST00000611839 155 ntBASIC1.58□□□□□ -2.16
LSM1O15116 AC091304.9-201ENST00000612091 226 ntBASIC1.58□□□□□ -2.16
LSM1O15116 AC026585.1-201ENST00000619582 524 ntBASIC1.58□□□□□ -2.16
LSM1O15116 RNU6-338P-201ENST00000383888 105 ntBASIC1.57□□□□□ -2.16
LSM1O15116 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
LSM1O15116 U8.13-201ENST00000390842 128 ntBASIC1.57□□□□□ -2.16
LSM1O15116 RNU6-607P-201ENST00000411283 108 ntBASIC1.57□□□□□ -2.16
LSM1O15116 RPL21P90-201ENST00000415692 466 ntBASIC1.57□□□□□ -2.16
LSM1O15116 ELOCP4-201ENST00000420090 333 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AL358453.1-201ENST00000422522 250 ntBASIC1.57□□□□□ -2.16
LSM1O15116 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM1O15116 AL035666.1-201ENST00000446195 348 ntBASIC1.57□□□□□ -2.16
LSM1O15116 EPS15P1-201ENST00000448836 336 ntBASIC1.57□□□□□ -2.16
LSM1O15116 HMGN2P23-201ENST00000456759 269 ntBASIC1.57□□□□□ -2.16
LSM1O15116 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.57□□□□□ -2.16
LSM1O15116 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM1O15116 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM1O15116 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.57□□□□□ -2.16
LSM1O15116 EEF1A1P37-201ENST00000522748 715 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AP003461.1-201ENST00000528866 78 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AC087441.2-201ENST00000529141 262 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AK6P1-201ENST00000540219 478 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.57□□□□□ -2.16
LSM1O15116 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM1O15116 AC112191.3-201ENST00000604371 277 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AC016925.2-201ENST00000605108 242 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AC091304.6-201ENST00000619761 202 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AL359740.1-201ENST00000624340 592 ntBASIC1.57□□□□□ -2.16
LSM1O15116 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.57□□□□□ -2.16
LSM1O15116 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LSM1O15116 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LSM1O15116 CBX3P1-201ENST00000325243 554 ntBASIC1.56□□□□□ -2.16
LSM1O15116 RNU6-1285P-201ENST00000363480 105 ntBASIC1.56□□□□□ -2.16
LSM1O15116 SNORD32B-201ENST00000364460 84 ntBASIC1.56□□□□□ -2.16
LSM1O15116 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LSM1O15116 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
LSM1O15116 RNU6-387P-201ENST00000411331 105 ntBASIC1.56□□□□□ -2.16
LSM1O15116 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
LSM1O15116 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.56□□□□□ -2.16
LSM1O15116 MTCYBP39-201ENST00000437562 491 ntBASIC1.56□□□□□ -2.16
LSM1O15116 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.56□□□□□ -2.16
LSM1O15116 TAF9P1-201ENST00000445421 515 ntBASIC1.56□□□□□ -2.16
LSM1O15116 RPL39P29-201ENST00000447779 157 ntBASIC1.56□□□□□ -2.16
LSM1O15116 TAF9P2-201ENST00000454958 515 ntBASIC1.56□□□□□ -2.16
LSM1O15116 AL122001.1-201ENST00000457027 370 ntBASIC1.56□□□□□ -2.16
LSM1O15116 RNU6-333P-201ENST00000459117 107 ntBASIC1.56□□□□□ -2.16
LSM1O15116 MTND3P25-201ENST00000509243 135 ntBASIC1.56□□□□□ -2.16
LSM1O15116 TPT1P8-201ENST00000510120 555 ntBASIC1.56□□□□□ -2.16
LSM1O15116 RNVU1-2-201ENST00000516326 135 ntBASIC1.56□□□□□ -2.16
LSM1O15116 RNU6-1220P-201ENST00000517126 108 ntBASIC1.56□□□□□ -2.16
LSM1O15116 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.56□□□□□ -2.16
LSM1O15116 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.56□□□□□ -2.16
LSM1O15116 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.56□□□□□ -2.16
LSM1O15116 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.56□□□□□ -2.16
LSM1O15116 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.56□□□□□ -2.16
LSM1O15116 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.56□□□□□ -2.16
LSM1O15116 AC137800.2-201ENST00000574375 120 ntBASIC1.56□□□□□ -2.16
LSM1O15116 MIR3945-201ENST00000581853 98 ntBASIC1.56□□□□□ -2.16
LSM1O15116 AC018889.1-201ENST00000605372 397 ntBASIC1.56□□□□□ -2.16
LSM1O15116 AL121992.2-201ENST00000606262 256 ntBASIC1.56□□□□□ -2.16
LSM1O15116 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.56□□□□□ -2.16
LSM1O15116 AC027807.2-201ENST00000616099 408 ntBASIC1.56□□□□□ -2.16
LSM1O15116 AC099842.1-201ENST00000619919 596 ntBASIC1.56□□□□□ -2.16
LSM1O15116 Z69720.2-201ENST00000624755 279 ntBASIC1.56□□□□□ -2.16
LSM1O15116 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
LSM1O15116 U4.7-201ENST00000638126 106 ntBASIC1.56□□□□□ -2.16
LSM1O15116 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LSM1O15116 RNU6-1214P-201ENST00000363650 109 ntBASIC1.55□□□□□ -2.16
LSM1O15116 RNU5E-5P-201ENST00000365379 116 ntBASIC1.55□□□□□ -2.16
LSM1O15116 RNU6-641P-201ENST00000384006 107 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms