Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SNORA80E-201ENST00000384744 137 ntBASIC2.19□□□□□ -2.06
CDX4O14627 CISD1P1-201ENST00000393907 327 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AL162578.1-201ENST00000406202 378 ntBASIC2.19□□□□□ -2.06
CDX4O14627 RNA5SP111-201ENST00000411386 101 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.19□□□□□ -2.06
CDX4O14627 RPL23AP36-201ENST00000413895 458 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX4O14627 SNRPEP10-201ENST00000420249 274 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AL160275.3-201ENST00000423876 471 ntBASIC2.19□□□□□ -2.06
CDX4O14627 MTCO3P18-201ENST00000440206 761 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AL078601.1-201ENST00000444542 271 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.19□□□□□ -2.06
CDX4O14627 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.19□□□□□ -2.06
CDX4O14627 AC139453.3-201ENST00000493276 369 ntBASIC2.19□□□□□ -2.06
CDX4O14627 MTCYBP18-201ENST00000501056 747 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AIG1P1-201ENST00000503376 148 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX4O14627 AC104806.1-201ENST00000508720 308 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AC025465.4-201ENST00000513422 638 ntBASIC2.19□□□□□ -2.06
CDX4O14627 RNU6-507P-201ENST00000516045 100 ntBASIC2.19□□□□□ -2.06
CDX4O14627 SCARNA17.1-201ENST00000516211 143 ntBASIC2.19□□□□□ -2.06
CDX4O14627 SCARNA17.2-201ENST00000516334 143 ntBASIC2.19□□□□□ -2.06
CDX4O14627 SNORA20.3-201ENST00000516880 132 ntBASIC2.19□□□□□ -2.06
CDX4O14627 SNORD19.2-201ENST00000516978 73 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX4O14627 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX4O14627 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX4O14627 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX4O14627 GLYCAM1-201ENST00000546596 285 ntBASIC2.19□□□□□ -2.06
CDX4O14627 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX4O14627 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.19□□□□□ -2.06
CDX4O14627 MIR4498-201ENST00000577599 66 ntBASIC2.19□□□□□ -2.06
CDX4O14627 MTCO3P13-201ENST00000577757 781 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.19□□□□□ -2.06
CDX4O14627 AC005730.3-201ENST00000583067 366 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.19□□□□□ -2.06
CDX4O14627 AC012119.1-201ENST00000603184 222 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AC069234.5-201ENST00000611056 416 ntBASIC2.19□□□□□ -2.06
CDX4O14627 DISC2.1-201ENST00000612827 205 ntBASIC2.19□□□□□ -2.06
CDX4O14627 SCARNA17.4-201ENST00000614296 143 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AP001486.3-201ENST00000615334 372 ntBASIC2.19□□□□□ -2.06
CDX4O14627 AL008636.1-201ENST00000625038 1018 ntBASIC2.19□□□□□ -2.06
CDX4O14627 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.19□□□□□ -2.06
CDX4O14627 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX4O14627 MIR6733-201ENST00000635723 61 ntBASIC2.19□□□□□ -2.06
CDX4O14627 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDX4O14627 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.18□□□□□ -2.06
CDX4O14627 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDX4O14627 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.18□□□□□ -2.06
CDX4O14627 RNU6-552P-201ENST00000362869 119 ntBASIC2.18□□□□□ -2.06
CDX4O14627 Y_RNA.86-201ENST00000363020 111 ntBASIC2.18□□□□□ -2.06
CDX4O14627 RNU6-750P-201ENST00000390946 107 ntBASIC2.18□□□□□ -2.06
CDX4O14627 SNORD37.1-201ENST00000390968 65 ntBASIC2.18□□□□□ -2.06
CDX4O14627 RNU6-332P-201ENST00000391193 108 ntBASIC2.18□□□□□ -2.06
CDX4O14627 AL356776.1-201ENST00000406574 447 ntBASIC2.18□□□□□ -2.06
CDX4O14627 SNORA11.4-201ENST00000408823 129 ntBASIC2.18□□□□□ -2.06
CDX4O14627 RNU2-25P-201ENST00000411041 191 ntBASIC2.18□□□□□ -2.06
CDX4O14627 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.18□□□□□ -2.06
CDX4O14627 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.18□□□□□ -2.06
CDX4O14627 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.18□□□□□ -2.06
CDX4O14627 AC007560.1-201ENST00000426912 237 ntBASIC2.18□□□□□ -2.06
CDX4O14627 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.18□□□□□ -2.06
CDX4O14627 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.18□□□□□ -2.06
CDX4O14627 RPS15AP7-201ENST00000439294 405 ntBASIC2.18□□□□□ -2.06
CDX4O14627 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.18□□□□□ -2.06
CDX4O14627 MTND3P10-201ENST00000450967 341 ntBASIC2.18□□□□□ -2.06
CDX4O14627 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.18□□□□□ -2.06
CDX4O14627 AC008571.1-201ENST00000467232 300 ntBASIC2.18□□□□□ -2.06
CDX4O14627 AC008628.2-201ENST00000502605 298 ntBASIC2.18□□□□□ -2.06
CDX4O14627 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDX4O14627 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.18□□□□□ -2.06
CDX4O14627 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.18□□□□□ -2.06
CDX4O14627 RPPH1-2P-201ENST00000516688 293 ntBASIC2.18□□□□□ -2.06
CDX4O14627 RNU6-572P-201ENST00000516724 80 ntBASIC2.18□□□□□ -2.06
CDX4O14627 RNU6-1183P-201ENST00000517054 60 ntBASIC2.18□□□□□ -2.06
CDX4O14627 SNORA31.19-201ENST00000517079 126 ntBASIC2.18□□□□□ -2.06
CDX4O14627 RNU6-685P-201ENST00000517088 95 ntBASIC2.18□□□□□ -2.06
CDX4O14627 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.18□□□□□ -2.06
CDX4O14627 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.18□□□□□ -2.06
CDX4O14627 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.18□□□□□ -2.06
CDX4O14627 AC007151.1-201ENST00000572774 483 ntBASIC2.18□□□□□ -2.06
CDX4O14627 MIR4703-201ENST00000577728 79 ntBASIC2.18□□□□□ -2.06
CDX4O14627 MIR5692A1-201ENST00000580523 69 ntBASIC2.18□□□□□ -2.06
CDX4O14627 MIR548AC-201ENST00000585049 88 ntBASIC2.18□□□□□ -2.06
CDX4O14627 AC008521.1-201ENST00000587471 187 ntBASIC2.18□□□□□ -2.06
CDX4O14627 AC011494.1-201ENST00000596454 237 ntBASIC2.18□□□□□ -2.06
CDX4O14627 AL138889.2-201ENST00000603883 242 ntBASIC2.18□□□□□ -2.06
CDX4O14627 AL670379.4-201ENST00000605279 254 ntBASIC2.18□□□□□ -2.06
CDX4O14627 AC080100.1-201ENST00000624239 5356 ntBASIC2.18□□□□□ -2.06
CDX4O14627 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CDX4O14627 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CDX4O14627 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.18□□□□□ -2.06
CDX4O14627 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDX4O14627 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDX4O14627 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
CDX4O14627 OR4G1P-203ENST00000641984 1631 ntBASIC2.17□□□□□ -2.06
CDX4O14627 MIR412-201ENST00000362142 91 ntBASIC2.17□□□□□ -2.06
CDX4O14627 Y_RNA.70-201ENST00000362886 110 ntBASIC2.17□□□□□ -2.06
CDX4O14627 RNU6-1287P-201ENST00000362914 107 ntBASIC2.17□□□□□ -2.06
CDX4O14627 RNU4-20P-201ENST00000365601 151 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms