Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SNRPEP10-201ENST00000420249 274 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AL627311.1-201ENST00000431514 115 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.87□□□□□ -2.27
SDCBPO00560 AL135790.2-201ENST00000437701 267 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AL008629.1-201ENST00000438615 184 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 CR769776.1-201ENST00000441254 787 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 KATNBL1P3-201ENST00000443475 909 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.87□□□□□ -2.27
SDCBPO00560 AC079448.1-201ENST00000449377 373 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AC130509.1-201ENST00000464158 433 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 OR2A41P-201ENST00000473586 105 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.87□□□□□ -2.27
SDCBPO00560 AC025465.3-201ENST00000510570 311 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 RNA5SP445-201ENST00000515889 115 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.87□□□□□ -2.27
SDCBPO00560 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.87□□□□□ -2.27
SDCBPO00560 BNIP3P6-201ENST00000549284 499 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AC019288.1-201ENST00000557918 224 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AC005668.1-201ENST00000571142 476 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AC107308.1-201ENST00000615897 301 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.87□□□□□ -2.27
SDCBPO00560 AC106858.1-201ENST00000637497 429 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.86□□□□□ -2.27
SDCBPO00560 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SDCBPO00560 MIR302D-201ENST00000362275 68 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 RNU6-112P-201ENST00000363599 104 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 RNY4P16-201ENST00000364768 94 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 RNU6-296P-201ENST00000384608 107 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 MIR29B2-201ENST00000385055 81 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SDCBPO00560 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SDCBPO00560 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.86□□□□□ -2.27
SDCBPO00560 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.86□□□□□ -2.27
SDCBPO00560 NCOR1P3-201ENST00000420479 303 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.86□□□□□ -2.27
SDCBPO00560 MTCYBP5-201ENST00000423752 1135 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.86□□□□□ -2.27
SDCBPO00560 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 RPS27P16-201ENST00000425758 201 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.86□□□□□ -2.27
SDCBPO00560 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.86□□□□□ -2.27
SDCBPO00560 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.86□□□□□ -2.27
SDCBPO00560 EEF1A1P39-201ENST00000440791 250 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 MTCO1P44-201ENST00000441935 243 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 GDI2P2-201ENST00000445131 608 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 AC245517.4-201ENST00000448601 281 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SDCBPO00560 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.86□□□□□ -2.27
SDCBPO00560 RPS26P55-201ENST00000471178 356 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 AC132942.1-201ENST00000486753 483 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 SNORA43.2-201ENST00000516652 128 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 AC107934.1-201ENST00000522215 217 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.86□□□□□ -2.27
SDCBPO00560 MIR4769-201ENST00000584126 77 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 DEFB131E-202ENST00000602581 683 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 AC013244.3-201ENST00000605614 388 ntBASIC0.86□□□□□ -2.27
SDCBPO00560 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.86□□□□□ -2.27
SDCBPO00560 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.86□□□□□ -2.27
SDCBPO00560 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
SDCBPO00560 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.85□□□□□ -2.27
SDCBPO00560 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SDCBPO00560 MIR412-201ENST00000362142 91 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 Y_RNA.327-201ENST00000365201 102 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 MTATP6P20-201ENST00000414147 562 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.85□□□□□ -2.27
SDCBPO00560 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.85□□□□□ -2.27
SDCBPO00560 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.85□□□□□ -2.27
SDCBPO00560 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.85□□□□□ -2.27
SDCBPO00560 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.85□□□□□ -2.27
SDCBPO00560 AC012308.1-201ENST00000451232 178 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 AC112492.4-201ENST00000456549 352 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.85□□□□□ -2.27
SDCBPO00560 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.85□□□□□ -2.27
SDCBPO00560 MIR449C-201ENST00000516047 92 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.85□□□□□ -2.27
SDCBPO00560 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.85□□□□□ -2.27
SDCBPO00560 RPL21P5-201ENST00000554662 472 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.85□□□□□ -2.27
SDCBPO00560 AL138889.2-201ENST00000603883 242 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 AL359757.2-201ENST00000624309 274 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 AC120349.3-201ENST00000624377 529 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 AC091895.1-201ENST00000624494 256 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 AC095038.3-201ENST00000634439 195 ntBASIC0.85□□□□□ -2.27
SDCBPO00560 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.85□□□□□ -2.27
SDCBPO00560 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SDCBPO00560 MTND4P16-201ENST00000466108 1367 ntBASIC0.84□□□□□ -2.27
SDCBPO00560 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
SDCBPO00560 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SDCBPO00560 MIR340-201ENST00000362125 95 ntBASIC0.84□□□□□ -2.27
SDCBPO00560 SNORD56.1-201ENST00000362913 68 ntBASIC0.84□□□□□ -2.27
SDCBPO00560 RNU6-960P-201ENST00000364056 120 ntBASIC0.84□□□□□ -2.27
SDCBPO00560 SNORD1A-201ENST00000364968 72 ntBASIC0.84□□□□□ -2.27
SDCBPO00560 RNU6-160P-201ENST00000384591 107 ntBASIC0.84□□□□□ -2.27
SDCBPO00560 MIR578-201ENST00000384828 96 ntBASIC0.84□□□□□ -2.27
SDCBPO00560 RNU6-1242P-201ENST00000391052 103 ntBASIC0.84□□□□□ -2.27
SDCBPO00560 RPS20P2-201ENST00000402520 389 ntBASIC0.84□□□□□ -2.27
SDCBPO00560 RNA5SP390-201ENST00000410191 113 ntBASIC0.84□□□□□ -2.27
SDCBPO00560 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.84□□□□□ -2.27
SDCBPO00560 RPL23AP30-201ENST00000432419 501 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms